Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02481 ATGTTCCTCTACTCACCAGAAGTTTACAATACCAACCATTTATCAGGCTCTGGCTCACGGTGGATATGGGGTGGCTCAGATGCTCGGTACATGTCAAATGTAGATACTGATTGGTATGATATAATAAAAATCACAGAGAAGCGGACAGGAAAAAATGAATTTCAAGGCATTGGACTTCTAAATTTCAACAAGACTGAGATTTCTCACTGGAAGCATAATTTTCCTGATGCAGCACATGTTGTTCTGCATCTGGAGTATGCTGCAAACAATGTGACATGGGAGTCTCTATACCCAGAATGGATTGACGAGGAAGAAGAAACCGAAGTTCCTGTTTGTCCTTCTCTACCAAGTCTTAGATCTCCTGGTACAAGACTCAATCTCATTGCTGTCAAGCTTCCTTGTAGGAATGGAGATAATTGGTCAAGAGACGTTGCTCGTTTGCACCTGCAGCTTGCAGCTGCTGGCCTTGCTACCTCTTTCAAAGGCAACTACCCCATTTATGTGCTCTTCATTACAAACTGTTTTCCAGTACCAAATCTGTTTACCTGCAAGGAACTAATTGGACGTGAAGGAAATGTATGGTTATACAGACCAAACTTGAGTGTTTTGAGAGAAAAGGTTCAGCTTCCAGTTGGATCATGTGAACTTGCACTTCCTATGAGAGGCAGAGAACTGGTTTACAATGGAAATGCTCCAAGAGAAGCCTATGCAACAATTCTGCATTCAGCTCATGTTTATGTTTGTGGAGCCATAGCTGCAGCACAAAGCATCCGAATGTCCGGATCAACTAGAGACCTTGTAATACTTGTTGATGAGACGATCAGTGGATATCACAGAAGTGGTTTGGAAGCAGCGGGGTGGAAGGTTAGAACAATACAGAGAATCAGAAACCCCAAAGCTGAAAAAGATGCTTACAATGAATGGAACTACAGCAAATTCAGGTTGTGGCAGCTGACAGATTATGACAAAATAATATTCATTGATGCAGATTTACTCATACTCAGAAACATAGATTTTCTATTTGGGATGCCGGAAATCACTGCAACTGGTAACAATGCCACTCTTTTTAACTCGGGTGTCATGGTGGTTGAACCATCAAACTGCACATTTCTGCTCCTGATGGATCATATTAATGAGATTGAGTCCTACAATGGAGGGGACCAAGGGTATTTGAATGAAATATTTACATGGTGGCACAGGATACCAAGACACATGAACTTCTTAAAGCATTTTTGGATTGGTGATGAGGAAGAGAAGAAACAAATGAAAACCATGCTGTTTGGTGCTGAGCCACCAATTCTCTATGTGCTTCACTATCTAGGTTTGAAGCCATGGTTGTGCTTCAGGGACTATGATTGTAACTGGAATGCTGATATATTTCATGAGTTTGCTAGTGATGTTGCACATGCAAAGTGGTGGAAGGTGCATGATGCAATGCCTGAGCTTTTACAACAGTTTTGCCTGTTGCCGTCAAAACAGAAGGCACAGTTGGAGTGGGATCGGAGTCAAGCGGAAATAGCAAACTACACAGACGGGCATTGGCGAATCAAAGCTAGAGATCGCCGCTTGAACAAGTGTATAGATAATCTGTGTAACTGGAAAAGCATGTTGCGGCATTGGGGAGAGACTAATTGGACAGATGATGAGTCTTTTACTCCCACACCTCCCATAGTTACCCTTTCGTCTCTTTCTGCTTTATGA 1701 0.4227 MFLYSPEVYNTNHLSGSGSRWIWGGSDARYMSNVDTDWYDIIKITEKRTGKNEFQGIGLLNFNKTEISHWKHNFPDAAHVVLHLEYAANNVTWESLYPEWIDEEEETEVPVCPSLPSLRSPGTRLNLIAVKLPCRNGDNWSRDVARLHLQLAAAGLATSFKGNYPIYVLFITNCFPVPNLFTCKELIGREGNVWLYRPNLSVLREKVQLPVGSCELALPMRGRELVYNGNAPREAYATILHSAHVYVCGAIAAAQSIRMSGSTRDLVILVDETISGYHRSGLEAAGWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMPEITATGNNATLFNSGVMVVEPSNCTFLLLMDHINEIESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWIGDEEEKKQMKTMLFGAEPPILYVLHYLGLKPWLCFRDYDCNWNADIFHEFASDVAHAKWWKVHDAMPELLQQFCLLPSKQKAQLEWDRSQAEIANYTDGHWRIKARDRRLNKCIDNLCNWKSMLRHWGETNWTDDESFTPTPPIVTLSSLSAL 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02481 566 PANTHER GLYCOGENIN SUBFAMILY MEMBER 2 543 - -
Car05g02481 566 SUPERFAMILY Nucleotide-diphospho-sugar transferases 233 479 IPR029044 -
Car05g02481 566 CDD GT8_Glycogenin 234 479 - -
Car05g02481 566 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 1 2 543 - -
Car05g02481 566 Pfam Glycosyl transferase family 8 240 343 IPR002495 GO:0016757
Car05g02481 566 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 232 481 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02481 Car-Chr5 69953743 69956949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02481 2 566 Glycosyltransferase AT3G18660 69.527 0.0 827
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02481 K20890 - gmx:100780439 1102.04