Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02450 ATGACTTCGACTGCAACCACCACTTTCTTCATCTACTCAAAATTCCCCAATTCGCTTCTTCGTTCACGTATTCATACCTGCAACAAACCCTTTTCACTTTCGCTTCCACCATCGAAACTCCGTGCAACCCATTTGTCAGTATGCACTTGTTCCCGCACCCCATTCACACCCTCCACGAGTTTCTCACCCCAAAGAAgtttatccaagttcatttcagaaaagattgcattttttctcaTTGGGTCGTTTATCTTCTTTGGTTGCTTTAACACAAGAACGGCTTTTGCAATTGCAGTACCCCCTTCTGGTGGAGTGTTGGAAGAGAAGGAGAAAAGCGATGAGGATGCAATGAATGAGAGAATTTTGGAAAAGGATCCAAGAAATGTTGAGGGTCTTAAGGTGATTGTGTATGGGAAAATTAGAAGAGGGAAATGTAAAGAGGCTGAGAAGTTTGTGAAGAGGTTAATTGATGTGGAGCCAAATGAGGTTGAATGGAGGCTTTTGCTGGCACTTTGTTATGAGACAATGGGGTATTTGAGTAAAGCTAAAACATTGTATTCAGAAATTTTGGAGCACAGGCCTCTTCTTGTTAGAGCTTTGCATAGTCTGGCTATGGTTATGCACAAAAACAATGAAGGTCCTGCTGTATTTGAAATGTTGAATAAGGCTCTAGAGTTAGCTATTAGTGAAGACAAAGTTACAGAGGAGAGAAATATAAGAATCTTAACTGCACAAATGCTTGTTGTACAGGGTGATTTGGAGGAAGGTTTAAAAAGATTTCAAGATTTGATCGATCAAAATCCTAGAGATTTTAGGCCTTATCTTTGCCAGGGAATAATATACAGTCTTCTGGATAAAAAGGAGGAAGCTGCAAAACAGTTTGAAACATATCAAGCTCTTGTGCCTGAAGAGTTTCCTCAGAGGGGATTTCTTGATGATATCACCATACAAGCAAAAGGAACATCCCGAGTACAGTTTCAGAAGGAATTTGGAAATCGATTTTCTGACCAAAAGTAG 1017 0.3874 MTSTATTTFFIYSKFPNSLLRSRIHTCNKPFSLSLPPSKLRATHLSVCTCSRTPFTPSTSFSPQRSLSKFISEKIAFFLIGSFIFFGCFNTRTAFAIAVPPSGGVLEEKEKSDEDAMNERILEKDPRNVEGLKVIVYGKIRRGKCKEAEKFVKRLIDVEPNEVEWRLLLALCYETMGYLSKAKTLYSEILEHRPLLVRALHSLAMVMHKNNEGPAVFEMLNKALELAISEDKVTEERNIRILTAQMLVVQGDLEEGLKRFQDLIDQNPRDFRPYLCQGIIYSLLDKKEEAAKQFETYQALVPEEFPQRGFLDDITIQAKGTSRVQFQKEFGNRFSDQK 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02450 338 Gene3D Tetratricopeptide repeat domain 237 315 IPR011990 GO:0005515
Car05g02450 338 Pfam Tetratricopeptide repeat 142 200 - -
Car05g02450 338 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 11 328 - -
Car05g02450 338 SUPERFAMILY TPR-like 140 303 IPR011990 GO:0005515
Car05g02450 338 Gene3D Tetratricopeptide repeat domain 109 236 IPR011990 GO:0005515
Car05g02450 338 PANTHER OS05G0182100 PROTEIN 11 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02450 Car-Chr5 69563320 69566213 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02450 - - aprc:113852504 438.343