Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02442 ATGAAGAACCTGAACTCCAACCTAATCCCGTTTCTTCCAGACGACGTCGCTGTTAACTGCCTCGCACGTGTCCCACGCTCTCAACACACAACCCTCTCCCTCGTTTCCAAACCATTCCGTTTGCTTCTCTCTTCTCCACTCTTCTTCACCGCTCGTTCTCTCCTTCACTCCACACAACACCTTCTCTACCTCTCTCTCCGCACACGCGCCACCACTCTCCAATGGTTCACACTACAAAACAACAACCACCTCCTTCCTCTCCCTCCTCTCCCTTCCCCCGCAATCGGCTCCGCTTACGCCGTCATCGGCCATATAATCTACGTCATCGGTGGTTCCGTCAATGATATCCCCTCCCGCCACGTCTGGCTTCTCGATTGCCGCTTCAACCGTTGGCTCCAAGGTCCATCCATGCGCGTTTGCCGTGAATTCGCCGCTGCCGGAGTTATCGACGGTAAGATTTACGTCATCGGCGGCTGTGTCCCTGACAATTGGGCTAGGTCAGCAAATTGGGCGGAGGTCTTCGATCCATCCACCGACCGTTGGGAGAGCGTTCCTAGTCCGCCAGAGATTCGCGAGAAGTGGATGCACGCAAGCGCCGTCGTGGACGACAAGGTTTACGCCATGGCTGACCGCGGCGGCGTCTCGCTTGATCCTCGTAACGGCGCGTGGGAGAGCGTGGGGAGTGAACTTGACCTCGGGTGGCGTGGGAGAGCGTGCGTTGTGAATGGGATTCTGTATTGCTATGATTACTTGGGGAAAATCAAGGGTTTTGATGTGAAACAAGGGTTGTGGAAGGAGCTGAAGGGTTTGGATAAGGGTTTGCCGAGGTTTCTGTGTGGAGCTACAATGGCTGATGTTGGTGGAAAATTGGTTGTGGTTTGGGAGTGCCAAGGGAATGAGAAGGGTAAAGAAATGGATATTTGGTGTGCTGAGATTGATGTGAATAAGAACAAGGATGGAGAATTGTGGGGTGAAGTTTGTTGGTTAAATAATGTTCTCTCTGTTCCAAAAGGATCTTCCATTGTCCACTGTTCTTCTGTTTCATTGTGA 1050 0.5248 MKNLNSNLIPFLPDDVAVNCLARVPRSQHTTLSLVSKPFRLLLSSPLFFTARSLLHSTQHLLYLSLRTRATTLQWFTLQNNNHLLPLPPLPSPAIGSAYAVIGHIIYVIGGSVNDIPSRHVWLLDCRFNRWLQGPSMRVCREFAAAGVIDGKIYVIGGCVPDNWARSANWAEVFDPSTDRWESVPSPPEIREKWMHASAVVDDKVYAMADRGGVSLDPRNGAWESVGSELDLGWRGRACVVNGILYCYDYLGKIKGFDVKQGLWKELKGLDKGLPRFLCGATMADVGGKLVVVWECQGNEKGKEMDIWCAEIDVNKNKDGELWGEVCWLNNVLSVPKGSSIVHCSSVSL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02442 349 Pfam Kelch motif 143 188 IPR006652 GO:0005515
Car05g02442 349 Pfam Kelch motif 97 138 IPR006652 GO:0005515
Car05g02442 349 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 5 332 - -
Car05g02442 349 SUPERFAMILY Kelch motif 80 331 IPR015915 GO:0005515
Car05g02442 349 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP6 5 332 - -
Car05g02442 349 Gene3D - 55 323 IPR015915 GO:0005515
Car05g02442 349 SUPERFAMILY F-box domain 4 93 IPR036047 GO:0005515
Car05g02442 349 SMART kelc_smart 152 204 IPR006652 GO:0005515
Car05g02442 349 SMART kelc_smart 105 151 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02442 Car-Chr5 69510166 69512635 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02442 11 333 Miscellaneous Gene Families AT4G33900 37.322 6.30e-60 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02442 - - gmx:100798508 525.398