Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02434 ATGACCGAGGGAAAAAAGACGTTAAGGCGGAAGACCCTCGCCAAGTGGCTTAAGGAAAGCATTCTGAGATTAGGTCCTACATTCATTAAAATTGGTCAGCAGTTCTCCACTAGGGTGGACATTCTACCTCAAGAATATGTTGACCAGTTGGCCGAACTTCAGGATCAAGTTCCTCCATTTCCCTCTGAGACTGCTATAGCTATTGTTGAAGAAGAGCTTGGAGCTCCTGTTCGTGATGTCTTTGATCAGTTTGACTATGAACCAATAGCTGCTGCAAGTCTTGGTCAGGTACATCGTGCAAAATTGAAGGGACAGGAGGTTGTTGTTAAAGTGCAAAGGCCTGGTCTCAAGGATCTTTTTGATATTGATCTAAAAAACCTGAGGGTTATTGCTGAATATCTTCAAAAAATTGATCCAAAGTCAGATGGTGCAAAGAGGGATTGGGTTGCTATTTATGATGAATGTGCCTCTGTCTTATATCAGGAGATTGATTACACTAAGGAGGCTGCTAATGCAGAATTATTTGCAAGTAACTTTAAGAACATGAGTTATGTGAAAGTTCCTACAATCTACTGGGATTATACCACGCCACAGATTCTGACAATGGAGTATGTTCCAGGAATTAAAATAAACAAAATACAAGCTTTAGATCAACTAGGCGTTGATCGCACAAGGTTAGGGAGATATGCAGTTGAGTCGTACTTGGAACAAATTTTATCGCATGGTTTCTTCCATGCTGACCCTCATCCTGGAAATATTGCAGTTGATGATGTCAATGGTGGAAGATTGATCTTCTATGATTTTGGAATGATGGGGAGCATCAGTCCAAACATTCGAGAAGGCTTGCTTGAAACATTTTATGGAGTGTATGAGAAGGATCCAGATAAGGTTCTTCAATCAATGATTCAAATGGGTGTTCTTGTCCCGACTGGAGATATGACTGCTGTTAGGCGAACAGCACAATTCTTTCTTAACAGTTTTGAGGAGCGCCTGGCTGCACAAAGGAGAGAGAGAGAGGAAGCAACAGGCGAACTTGGATTCAAAAAACCATTAAGCAAGGAGGAGAAAATAATGAAGAAGAAACAACGTCTAGCTGCTATTGGCGAAGATTTATTATCCATTGCCGGAGACCAACCCTTCCGATTTCCTGCTACATTTACATTTGTTGTAAGAGCCTTCTCAGTGTTGGATGGCATTGGAAAGGGCCTTGACCCGCGTTTTGACATTACTGAGATTGCCAAACCTTATGCTCTGGAGTTACTAAGGTTTCGTGAGGCAGGAGTTGAAGTTGCTTTAAAGGACTTCAGGAAGAGATGGGACAGACAATCTCAAGCATTTTACAACTTATTTAGGCAGGCTGACAGGGTTGACAAGCTTGCTACAGTTATCCAAAGACTGGAGCAAGGAGATCTAAAGCTCCGAGTTCGAACCTTAGAATCCGAGAGAGCATTCCAGCGTGTTGCCACAGTCCAGAAGACTATAGGGAATGCAGTAGCTGCTGGAAGCCTAATAAATCTTGCCACCGTTTTGTATCTCAATTCAATTCGTGTGCCTGCAATTGCAGCATATGTCTTCTGTGCATTCTTTGGTTTCCAAGTGCTCTTTGGCATTGTAAAGGTCAAGAAGCTAGATGAACAGGAACGATTGATAACCGGAACTGCATAA 1665 0.4228 MTEGKKTLRRKTLAKWLKESILRLGPTFIKIGQQFSTRVDILPQEYVDQLAELQDQVPPFPSETAIAIVEEELGAPVRDVFDQFDYEPIAAASLGQVHRAKLKGQEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAANAELFASNFKNMSYVKVPTIYWDYTTPQILTMEYVPGIKINKIQALDQLGVDRTRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDPDKVLQSMIQMGVLVPTGDMTAVRRTAQFFLNSFEERLAAQRREREEATGELGFKKPLSKEEKIMKKKQRLAAIGEDLLSIAGDQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLRFREAGVEVALKDFRKRWDRQSQAFYNLFRQADRVDKLATVIQRLEQGDLKLRVRTLESERAFQRVATVQKTIGNAVAAGSLINLATVLYLNSIRVPAIAAYVFCAFFGFQVLFGIVKVKKLDEQERLITGTA 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02434 554 CDD ABC1_ADCK3-like 53 301 - -
Car05g02434 554 PANTHER ABC TRANSPORTER-LIKE PROTEIN 2 552 - -
Car05g02434 554 Pfam ABC1 atypical kinase-like domain 52 300 IPR004147 -
Car05g02434 554 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 2 552 - -
Car05g02434 554 SUPERFAMILY Protein kinase-like (PK-like) 54 296 IPR011009 -
Car05g02434 554 Coils Coil 324 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02434 Car-Chr5 69447518 69461592 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02434 - - lja:Lj0g3v0083779.1 1037.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02434 05 69447518 69461592 Car05g02434 05 69447518 69461592 ECH
Car05g02434 05 69447518 69461592 Car04g03113 04 59247244 59256510 PCT