Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02422 ATGGCTGATATACAGGAAAGGTTGTTACCGTCCTTCTCGCCTAACCTACAACTGTTAGCAATGGATGAGGAGCTTTGGTTGATGGCTGAAGAGAGGGCCCAGGAAATACTGTGTTTAGTTCAACCTAATGTTGTTTCTGAGGTGAACAGAAAGGATATTATTGAATTTGTACAGAGGCTGATTGGAGGTTACTATGGGGGAGAGGTATTTGTGTTTGGATCAGTCCCGCTAAAAACCTATCTTCCAGATGGAGATATTGACTTGACAGTTCTCAGTCATGAAAGTGTAGAGGATGATTTGGCACAAGCAGTATGCAATCTACTTGGAAGTGGAGAGGAACTTGAATACGAAGTAAAAGACGTACAACATATACGTGCACAGGTAGGGGTTGTGAAATGCACCGTGAAAAATTTAGCAGTTGACATCTCTTTCAATCAGATGGCTGGACTCTATGCTCTGCGCTTTCTGGAGCAGGTTGACCAACTTGTCGGGAAAAACCACATCTTCAAACGCAGTATTATCTTGGTCAAAGCATGGTGCTATTATGAGAGCAGAATTCTTGGCGCACACCATGGCCTGCTCTCAACATATGCAGTGGAAATATTAGTTTTATATATTATCAATTGTTTTCATTCAACAGTGCGCGGTCCTCTAGAGGTGCTGTACAGATTTTTGGACTACTACAGCACATTTGATTGGGAGAAAAATTATGTCACTGTAGATGGTCCACAAGCCTTATCCTCTCTTCCAGAAATTGTTGAGAAACCAGAATCTGATCGAGTTGGATTCTTGCTCAGTAAAGAGCTTCTGAAAAATTACAGGGATATGTGCTCTGTTCCAAAGGCGTCTGAGCCTTTTACCCTGCAATTTCTGCCCAAGCACCTGAACATTTTGGATCCTCTAAAAAACGACAACAACCTAGGCCGCAGTGTCAGCAGAGGCAATTTACATCGAATTAGATTCGCTCTTGCCTTTGGTGCTCGAAAGCTTAAGGAGATCCTTACACTTCCAGGACAAAACATGGGTGCAGCGCTTGAGATGTTTTTCATGAACACCTTAAACAGAAATGGAAAAGGACAAAGGCCAGATATTGATGTTCCTGTTCCTGCATTTGGTACTGGAAGATTTGAAGAGCCTGTCCTCGTGGGAGATTGTGACAGTTACTATGGTGGATTACAATATGTTCAGTTGTATCGTAACTATGCTATGCCGCCCATTGGTCAACTGAATTCCCCATCAACACTATTCGATGCTGATATGCTTGCACTACAACAAAACTGGTATATGTATTATCATAGGGGTACTGATTTATATGTCCCAAGACAGCCAATCTTTCATCCAAATCCTCCTCAAGCAACTTATGGCCTTGAAGAAATAGGGAAATCCCGAGGAACAGGCACATACATACCTGACATGACTCATAGTACCTACTGGAATGTCCGTGCAAGAGGGACCAAGCCAAGGAGAGTTGGTCAAGTGAATAATAATAATGCATCGCCGAAATCGTTTGAGGGAAAGCAAGTAGAAGAGGATCCTCCTGTGACAGACATAAATGATAATAATTCCAAGTCCTTTGAGCTCTTGAAGGAAGATTTTCCTCTTCTTCCAAGCGTTGGTAACACCGAATCGTCAGCATCCCAAGAATCTGAGCGGGACAAGAATTCCTCATCTGATCAACTAATTATTGAGTTTGGAACTTACAGTATATCGCGATCAATGACAGAAATGAGTTTGGGAACAAAGGATAGGAAAGAGGATTCTGGCGTTTCATTCTCTCAAGGTGCTACACCAGTTGTTTCAAGTCTCGCAGTGAAGGGGAAAGAGAAATCTATGCAGATCGAAGAGAAGATGGATTGA 1857 0.4243 MADIQERLLPSFSPNLQLLAMDEELWLMAEERAQEILCLVQPNVVSEVNRKDIIEFVQRLIGGYYGGEVFVFGSVPLKTYLPDGDIDLTVLSHESVEDDLAQAVCNLLGSGEELEYEVKDVQHIRAQVGVVKCTVKNLAVDISFNQMAGLYALRFLEQVDQLVGKNHIFKRSIILVKAWCYYESRILGAHHGLLSTYAVEILVLYIINCFHSTVRGPLEVLYRFLDYYSTFDWEKNYVTVDGPQALSSLPEIVEKPESDRVGFLLSKELLKNYRDMCSVPKASEPFTLQFLPKHLNILDPLKNDNNLGRSVSRGNLHRIRFALAFGARKLKEILTLPGQNMGAALEMFFMNTLNRNGKGQRPDIDVPVPAFGTGRFEEPVLVGDCDSYYGGLQYVQLYRNYAMPPIGQLNSPSTLFDADMLALQQNWYMYYHRGTDLYVPRQPIFHPNPPQATYGLEEIGKSRGTGTYIPDMTHSTYWNVRARGTKPRRVGQVNNNNASPKSFEGKQVEEDPPVTDINDNNSKSFELLKEDFPLLPSVGNTESSASQESERDKNSSSDQLIIEFGTYSISRSMTEMSLGTKDRKEDSGVSFSQGATPVVSSLAVKGKEKSMQIEEKMD 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02422 618 Pfam Nucleotidyltransferase domain 51 118 IPR002934 GO:0016779
Car05g02422 618 Gene3D Beta Polymerase, domain 2 30 168 IPR043519 -
Car05g02422 618 SUPERFAMILY Nucleotidyltransferase 21 187 IPR043519 -
Car05g02422 618 MobiDBLite consensus disorder prediction 535 559 - -
Car05g02422 618 MobiDBLite consensus disorder prediction 572 618 - -
Car05g02422 618 MobiDBLite consensus disorder prediction 484 521 - -
Car05g02422 618 CDD NT_PAP_TUTase 49 156 - -
Car05g02422 618 MobiDBLite consensus disorder prediction 489 503 - -
Car05g02422 618 PANTHER NUCLEOTIDYLTRANSFERASE DOMAIN PROTEIN 1 597 - -
Car05g02422 618 Gene3D - 214 336 - -
Car05g02422 618 SUPERFAMILY PAP/OAS1 substrate-binding domain 168 336 - -
Car05g02422 618 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 1 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02422 Car-Chr5 69343449 69349448 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02422 - - aip:107623369 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01441 02 41300900 41320473 Car05g02422 05 69343449 69349448 ECH
Car05g02422 05 69343449 69349448 Car05g02422 05 69343449 69349448 ECH