Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02261 ATGGTGGATTCAGAGCGAATCCAAAACCCATGGATGGCTTCGGATCAAACTTCACTTCAAATGAATCCCAACGCTACACAACGCTTTTCTCCTCCTCCGCCCCAATTAACATCAAATAATGATAAATTAGGGATTGCAGAACGTGCTACCTCTGCCGCCGGCGCCGCCTTCCTCTCCGCCGTTATTGTCAATCCCCTCGATGTTGCCAAGACAAGGTTGCAAGCACAAGCTGCAGGGGTTGCTTATTCTCATCCACTTAGTAATATGATCAGTCGAATGTCTTGTTTTGGGCCAAATATGATGTTTGCTGATTTAAGATGTTCTCCATCATGTACTCGGGCTGGATTCCATGGCACGGTATCACTTTGTCCTCCCGATTGTTTTCGGTACAAAGGAACACTGGATGTCATTTCTAAAATTATACAACAGGAAGGATTTACTAGGCTATGGAGAGGCACAAACGCAGGGTTGGCACTTGCAGTACCGACTGTTGGAATTTACCTTCCTTGCTACGACATATTCCGAAACTGGTTCGAGGAATTCACAGCCAAAAGTGCTCCAACCGCAACTCCATACGTACCTTTAGTGGCTGGTTCATTGGCACGCTCATTGGCTTGTGCAACTTGTTATCCTATTGAACTTGCCCGAACTCGCATGCAGGCATTTAAAGAGACTCAAATCGATAAAAAGCCACCTGGTGTATTCAAGACTTTACTAGGTGTTGTCTCCAATGGCAAGGGCACAAATAGTCCTCCGAACAGCTTGCAAGGTTATCGTGTCCTGTGGACTGGCATGGGTGCACAACTTGTTCGTGATGTACCATTCTCTGCGATTTGTTGGTCAACACTCGAGCCCACTAGAAGAAAACTTATTAGTTTGGTTGGAGGCAATGATGCCAGTCTATTGAGTGTTCTTGGCGCAAATTTTTCAGCTGGATTTGTTGCAGGAACTCTCGCTGCTGGAGCTACATGTCCACTAGATGTTGCAAAAACTCGAAGGCAGATAGAGATGGATCCTATAAGAGCATTGAAGATGACTACAAGACAGACACTGATGGAAATTTGGAGAGATGGGGGCTTCAAAGGACTTTTTACTGGTTTTGGTCCGCGAGTTGGTCGAGCTGGCCCCTCCGTAGGAATTGTGGTTTCATTTTATGAAGTTGTAAAGTTTGCCCTAAATCACCGGTACACAACATCATGA 1200 0.4567 MVDSERIQNPWMASDQTSLQMNPNATQRFSPPPPQLTSNNDKLGIAERATSAAGAAFLSAVIVNPLDVAKTRLQAQAAGVAYSHPLSNMISRMSCFGPNMMFADLRCSPSCTRAGFHGTVSLCPPDCFRYKGTLDVISKIIQQEGFTRLWRGTNAGLALAVPTVGIYLPCYDIFRNWFEEFTAKSAPTATPYVPLVAGSLARSLACATCYPIELARTRMQAFKETQIDKKPPGVFKTLLGVVSNGKGTNSPPNSLQGYRVLWTGMGAQLVRDVPFSAICWSTLEPTRRKLISLVGGNDASLLSVLGANFSAGFVAGTLAAGATCPLDVAKTRRQIEMDPIRALKMTTRQTLMEIWRDGGFKGLFTGFGPRVGRAGPSVGIVVSFYEVVKFALNHRYTTS 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02261 399 Pfam Mitochondrial carrier protein 43 179 IPR018108 -
Car05g02261 399 Pfam Mitochondrial carrier protein 191 290 IPR018108 -
Car05g02261 399 Pfam Mitochondrial carrier protein 307 394 IPR018108 -
Car05g02261 399 SUPERFAMILY Mitochondrial carrier 41 387 IPR023395 -
Car05g02261 399 ProSiteProfiles Solute carrier (Solcar) repeat profile. 189 289 IPR018108 -
Car05g02261 399 Gene3D Mitochondrial carrier domain 105 396 IPR023395 -
Car05g02261 399 ProSiteProfiles Solute carrier (Solcar) repeat profile. 43 177 IPR018108 -
Car05g02261 399 ProSiteProfiles Solute carrier (Solcar) repeat profile. 303 391 IPR018108 -
Car05g02261 399 PANTHER BNACNNG35730D PROTEIN 37 399 - -
Car05g02261 399 PANTHER FI19922P1-RELATED 37 399 IPR045315 GO:1990542
Car05g02261 399 Gene3D Mitochondrial carrier domain 22 95 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02261 Car-Chr5 67790481 67794953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02261 134 390 Organic Solute Cotransporters AT3G55640 27.376 9.36e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02261 K15119 - gmx:100810960 677.937