Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02255 ATGCAGAGCAAGGGATCGAGCCACAGACTTTCAAGTATGGCGGCTAATCGATCGCGAATTCCTTCACTCCTCATCTCCATGTTCGCCACTTTCGCCTCTATCTACGTCGCCGGAAGGTTGTGGCAAGACGCAGGGAATCGTGTTTATCTCATCAAAGAGCTTGATAGAATCACTGGCCAGGGACAATCTGCTATATCAGTGGATGATACATTGAAGATCATAGCCTGCAGGGAACAACATAAGAAGCTCGATGTGCTTGAGATGGAACTTGCTTCAGCTAAACAAGAGGGTTTTGTTTCAAAGGGGTTGGTTGAGACCAACGGTACTTACTCTAAGAGACGGCCCTTGGTAGTCATAGGTATATTGACAAAGTTTGGCCGCCAAAAGAATAGAGATGCAATTCGCAAGGCTTGGATGGGAAGCGGTGCAGCTTTCAAGAAAATTGAAGATGGAAAGGGCATCATTGTGCGATTTGTTATTGGTAGAAGTGCAAATAGTGCGGACGGTCTGGATAAAGACATTGATCGTGAGAATAGGTTGACGAATGACTTCCTAATTCTAGATGATCATGTGGAAGGAAACCCGGGACACCCAGAGAAGGCTAAATTGTTTTTTGCTCACGCTGCAGACAAATGGGATGCGGAGTTTTACGCTAAAGTCAATGATGATGTTTATGTAAATATTGATGCCTTGGGAGCTACACTTGCAACTCATTTGGACAAACCTCGTCTTTACATGGGATGCATGAAATCGGGCGAAGTTTTCTCTGAACAGAACCAAAAATGGTATGAACCAGAATGGTGGAAGTTTGGTGACAAAAAATCATATTTTCGTCACGCATCAGGAGAGATGTATGTCATATCACGAGCTTTGGCTAGATTCATATCAATAAACAGATCTATTCTTCGTACCTATGCCCATGATGATGTGAGTACTGGATCCTGGTTTATTGGACTTGATGCAAAGTATGTTGACGAGGCAAAGTTTTGTTGCTCGTCTTGGTCGACAGGAGCAATTTGTGCGGGTGTTTGA 1032 0.439 MQSKGSSHRLSSMAANRSRIPSLLISMFATFASIYVAGRLWQDAGNRVYLIKELDRITGQGQSAISVDDTLKIIACREQHKKLDVLEMELASAKQEGFVSKGLVETNGTYSKRRPLVVIGILTKFGRQKNRDAIRKAWMGSGAAFKKIEDGKGIIVRFVIGRSANSADGLDKDIDRENRLTNDFLILDDHVEGNPGHPEKAKLFFAHAADKWDAEFYAKVNDDVYVNIDALGATLATHLDKPRLYMGCMKSGEVFSEQNQKWYEPEWWKFGDKKSYFRHASGEMYVISRALARFISINRSILRTYAHDDVSTGSWFIGLDAKYVDEAKFCCSSWSTGAICAGV 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02255 343 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 337 IPR002659 GO:0006486|GO:0016020|GO:0016758
Car05g02255 343 Coils Coil 76 96 - -
Car05g02255 343 Pfam Galactosyltransferase 130 325 IPR002659 GO:0006486|GO:0016020|GO:0016758
Car05g02255 343 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE HPGT1 1 337 - -
Car05g02255 343 Gene3D - 111 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02255 Car-Chr5 67718740 67724619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02255 22 343 Glycosyltransferase AT5G53340 71.429 2.09e-176 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02255 K20854 - gmx:100779561 623.239