Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02247 ATGCAACCAGCAGAAACAGAGAAGAATCCTGTAAGATATATGCATACAGTTTCAGAAGCTGGTCGACTTCTCCCTTCATCAAGCCGCTGGAACTCCATAGCACTTGACTTTAAACTTGCTCCAAAGTCTTCTACTTCCTATGATTCCATCCCTTCACAGTTTCCAAAATCTGTTGACTACAATCTTGTCATCACCGATAAAAAACACTTCCATCGTTTTACTTTTATTACAGTAGCAATAGTTTTTGCTGTCATAGCAGTGGCTTTGCTTGTTCACTTTTTACCTCAGAAGCATAAGCATCAAGGCTCTTCAATCAATCTCAAGTTGGCAATAAATCAGGCTCTAACATTTTATGATGCTCAAAAATCTGGGAACTATCCAAGGAACAGTCCAGTGAAATATAGAGGAGACTCAGGATTACAAGATGGGAATTCAGCAAAGACTAATCTTAGTGGTGGATATTATGATTCAGGAAACAACATTAAGTTTACATTCACCACAGCTTATACTATGACTTTGTTGAGTTGGACTGCAATGGAATATCAAAGTAAATATGCTGATATTGATGAGCTTGACCATGTCAGAGACATCATCAGATGGGGTACTGACTATTTGCTCAAGGTGATCATTCCTTCACCTGCTGGTTCCAACCTAACACTGTATTCCCAGGTTGGAAGTACAATTAGTACTAACAATGAACCGAATGATATAAGTTGCTGGCAAAGACCTGAAGACATGAGTTATGTTAGACCAGTTTCGGTTTGTGATGGTTCTGCTACCGATTTAGCTGGTGAAATTGTGGCAGCATTATCTGCGGCGTCGATGGTATTCAGAGAAGACCAAGATTACTCAGGGAAACTAGTTCAAGCAGCAGAAAGCCTATATGAGGCAGTTACAAAGGAAGATCCTAAAAAGCAAGGAACCTATACCTCTCTTGATGCCTGTGGAAAACAAGCAAGAATGCTTTATAACTCATCTAGTTACAAAGATGAGTTAGCTTGGGGAGCAACTTGGTTATTTCTTGCTACTAAAAACACTAATTATCTTGCAAATGCAACTGAGTTTTTTTTATCAGCCAAAAGTGGTGAAACAAATTTAGACAAAGGGGTGTTTTATTGGAATAACAAGCTCAATGCTGTTGCGGTTTTACTTGCTGGTATTCGATATTTCCAGGATCCTGGTTTTCCATATGAAGATGTTTTGAAATTTTCATCAAATACTACTGACTCCCTCATGTGTTCGTATGTTTTCAAAAAATATTTGAGCAGGACACCTGGTGGATTTATTATACCAAAACCTTATAATGGACCATTACTCCAGTATGCTGCAACAGCCTCTTTTTTAAGTAAATTGTATAGTGATTACATTGATCATCTCAAAATATCCGGTGCAAGCTGCGAAACCGATGAATTCTCGGTGACAATGCTTCGCGATTTCGCTAGCTCTCAGGTTAACTACATCTTAGGACAAAATCCTATGAAAATGAGCTATTTAGTGGGATATGGTGGCAAGTTTCCAGTCCATGTTCATCACAGAAGTGCATCAATCCCTTGGGATAATCGGCACTACAATTGCGATGATGGTAAAAAATGGCTGAACTCTAAAGATCCAAATCCACAAGTTCTTTTGGGAGCAATGGTGGGAGGGCCAGACACAAATGATAAGTTCGCTGATCAAAGAGGCAATCAAAGGTTCACTGAGCCAACCATAGCAAGCAATGCTGGCTTAGTTGCAGCATTGATTGCACTTCAAGATCCTCCTTATAATTCACATGACTTGAAAAACTCATTGTGGGAATGGACTTGA 1806 0.3926 MQPAETEKNPVRYMHTVSEAGRLLPSSSRWNSIALDFKLAPKSSTSYDSIPSQFPKSVDYNLVITDKKHFHRFTFITVAIVFAVIAVALLVHFLPQKHKHQGSSINLKLAINQALTFYDAQKSGNYPRNSPVKYRGDSGLQDGNSAKTNLSGGYYDSGNNIKFTFTTAYTMTLLSWTAMEYQSKYADIDELDHVRDIIRWGTDYLLKVIIPSPAGSNLTLYSQVGSTISTNNEPNDISCWQRPEDMSYVRPVSVCDGSATDLAGEIVAALSAASMVFREDQDYSGKLVQAAESLYEAVTKEDPKKQGTYTSLDACGKQARMLYNSSSYKDELAWGATWLFLATKNTNYLANATEFFLSAKSGETNLDKGVFYWNNKLNAVAVLLAGIRYFQDPGFPYEDVLKFSSNTTDSLMCSYVFKKYLSRTPGGFIIPKPYNGPLLQYAATASFLSKLYSDYIDHLKISGASCETDEFSVTMLRDFASSQVNYILGQNPMKMSYLVGYGGKFPVHVHHRSASIPWDNRHYNCDDGKKWLNSKDPNPQVLLGAMVGGPDTNDKFADQRGNQRFTEPTIASNAGLVAALIALQDPPYNSHDLKNSLWEWT 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02247 601 PANTHER ENDO-1,4-BETA-GLUCANASE 22 596 - -
Car05g02247 601 Gene3D - 104 586 IPR012341 GO:0005975
Car05g02247 601 SUPERFAMILY Six-hairpin glycosidases 105 585 IPR008928 GO:0005975
Car05g02247 601 Pfam Glycosyl hydrolase family 9 110 580 IPR001701 GO:0004553|GO:0005975
Car05g02247 601 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 486 512 IPR018221 -
Car05g02247 601 PANTHER ENDOGLUCANASE 22 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02247 Car-Chr5 67665078 67668238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02247 56 583 Glycoside Hydrolase AT5G49720 45.488 2.14e-142 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02247 K01179 - gmx:100805472 1000.35