Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02238 ATGGATATTTGGGATAGTTGGTTGGTTTTGCAATTAATGCAGTTACTGGGTATGTTCAGTTTTTGGATCTCATTTTCCAAGTTTACAACTTTATTCTCCAAGAGTTACAAAATTATCAAAGGTAACTGCAATGCATGGATCTTAGTTTCTTTCAATTTGTTGGTCACAACTGGGTCTTTGATATCATTCATGTTAGTCCTTTCATGGGGATATTCATATGCATTTCCCACTACTCACAAAGTTATTCAGAGTTATGAAATTAATCCTAGCACTAATTATAGTTCTAATTCACTAGTTAAGAGCTATGACGATGAGGCTTTAAAATTCAATGTTTCAAGGGACACCTGCCATGTGTTTGATGGAAGTTGGATTCAGGATGATAGTTACCCTTTATATGATGCTTCTCATTGTCCATTTATAGAAAGAGGTTTTAATTGTTTGGCAAATGGACGTAAAGATAGAGGTTTTACAAAGTGGAGATGGAAACCAAATAATTGTGATATTCCAAGGTTTGATGCACATAGAATACTCGAACTACTTCGTGGGAAAAGGGTTGTTTTTGTCGGTGATTCGTTGAGTAGGACTCAATGGGAGTCTTTGATATGTTTGCTAATGACAGGAGTTGAAGATAAGAAGAGTGTTTATGAAATCAAAGGCAACAAGATCACCAGACAGATTAGATTTCTAGGTGTGAGGTTTAGTACTTTTGATGTTAGAATCGATTTTTATCGTTCTGTTTTTCTGGTGAAGCCTGGTCCGGTGCCTAGTTTTGCACCGAAGAGGGTGAAGACCGCACTGAGATTGGACAAGATCGACGATATTAGCCGCGAGTGGATTGACTCTGATGTGCTTATATTCAATTCAGGCCACTGGTGGACAAGGACTAAGCTTTCTGATATGGGCTGGTATTTTCAGGTTGGTAACTCACTGAAGCTTAGAATGCCAATTAATTCAGCATTCAAAACAGCTTTGGTCACCTGGGCATCTTGGGTAGAGAATACAATTGACACCAACAGAACAAGAGTATTCTTCCGTACTTTTGAATCATCACATTGGAGTGGACATAACCGTAAGGCTTGCAAGGTGACTAGAAACCCTTGGAAGAGAACACATGGCAAGGACAGAAGCCCAATTTCAGATATAATCAAAAGAGTTGTAAAAAATATGAGTGCTCCTGTGACGATTTTGAACGTGACACCGATGGATGCTTATAGGAGTGATGGCCATGTTGGCCCTTGGAGTGACAATCCATCTGTAGCTGATTGCAGTCATTGGTGTTTACCTGGTGTTCCTGATATGTGGAACGAAATTCTCTTCTCAAATTTGCTACAAAAAGATGGAGCATGTTAA 1350 0.3889 MDIWDSWLVLQLMQLLGMFSFWISFSKFTTLFSKSYKIIKGNCNAWILVSFNLLVTTGSLISFMLVLSWGYSYAFPTTHKVIQSYEINPSTNYSSNSLVKSYDDEALKFNVSRDTCHVFDGSWIQDDSYPLYDASHCPFIERGFNCLANGRKDRGFTKWRWKPNNCDIPRFDAHRILELLRGKRVVFVGDSLSRTQWESLICLLMTGVEDKKSVYEIKGNKITRQIRFLGVRFSTFDVRIDFYRSVFLVKPGPVPSFAPKRVKTALRLDKIDDISREWIDSDVLIFNSGHWWTRTKLSDMGWYFQVGNSLKLRMPINSAFKTALVTWASWVENTIDTNRTRVFFRTFESSHWSGHNRKACKVTRNPWKRTHGKDRSPISDIIKRVVKNMSAPVTILNVTPMDAYRSDGHVGPWSDNPSVADCSHWCLPGVPDMWNEILFSNLLQKDGAC 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02238 449 Pfam PMR5 N terminal Domain 115 167 IPR025846 -
Car05g02238 449 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 168 440 IPR026057 GO:0016740
Car05g02238 449 PANTHER LEAF SENESCENCE RELATED PROTEIN-LIKE 43 443 - -
Car05g02238 449 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 43 443 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02238 Car-Chr5 67602223 67604952 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02238 - - gmx:100802445 732.25