Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02234 ATGGATATTGCTCATCTTTTGTTTGGCATATTTGGGAATGCTTCTGCTATGTTTCTCTTCTTGGCACCAGTGATTACATTCAAGAGGATTATAGTGAACAGATCCACCGAGAAATTCTCAGGCATTCCATATGTTATGACACTGCTCAATTGTCTTCTTTCTGCTTGGTATGGCCTACCTTTTGTGTCTCCCAACAACATACTAGTATCAACAGTTAATGGCACCGGAGCAGGGATTGAGATCATATATGTTTTGGTATTTATCATATTTTCACCTAAGAAGGAAAGGATCAAAATTGTAGGTCTCTTCACCGTGGTACTCTCTATGTTCTCTACTGTTGTGTTCGTGTCGCTCTTTGCCCTACATGGCATTTCTAGGAAGCTTTTCTGCGGTTTCGCCGCTGCCATATTTTCCGTCATCATGTATGGTTCACCACTCTCAATTATGAGACTAGTGATAAAAACCAAAAGTGTGGAGTTCATGCCATTCTTCTTATCTTTGTTTGTGTTTCTTTGTGGCACTTCCTGGTTTATCTTCGGTGTGTTAGGCCGTGACCTATTTATTGCTGTACCTAATGGTCTTGGTTCTGTTTTGGGGGTAATGCAACTAATTTTGTATTTCATATACCGTGACAAGAAAGGCATTACAAAAAAGCAGGCCCAAATAGAGGAGGGATCAATGGAGATTGGCAATGCAAAACCGTATCAAATGAAGCAATTCAATGGAAATGAAATTCAAGGATGA 744 0.3992 MDIAHLLFGIFGNASAMFLFLAPVITFKRIIVNRSTEKFSGIPYVMTLLNCLLSAWYGLPFVSPNNILVSTVNGTGAGIEIIYVLVFIIFSPKKERIKIVGLFTVVLSMFSTVVFVSLFALHGISRKLFCGFAAAIFSVIMYGSPLSIMRLVIKTKSVEFMPFFLSLFVFLCGTSWFIFGVLGRDLFIAVPNGLGSVLGVMQLILYFIYRDKKGITKKQAQIEEGSMEIGNAKPYQMKQFNGNEIQG 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02234 247 Gene3D - 124 222 - -
Car05g02234 247 Pfam Sugar efflux transporter for intercellular exchange 131 213 IPR004316 GO:0016021
Car05g02234 247 Pfam Sugar efflux transporter for intercellular exchange 7 94 IPR004316 GO:0016021
Car05g02234 247 PANTHER RAG1-ACTIVATING PROTEIN 1 4 237 - -
Car05g02234 247 Gene3D - 6 97 - -
Car05g02234 247 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 237 IPR018180 GO:0051119
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02234 Car-Chr5 67551832 67556478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02234 1 190 Miscellaneous Gene Families AT1G21460 74.737 3.50e-104 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02234 K15382 - gmx:100800304 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02964 04 56945343 56948261 Car05g02234 05 67551832 67556478 PCT