Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02230 ATGGCTCTGGAGAATTGTTTAAGAGTATCCACAGCAAGACCCCATTGTCTTCCTCCATTATTTTCATCTTCAAGGGAAAAGCTTGTTTTCTCAGCTCAAAGAGGAGGGTTCAAGAAATCAGTGCAAAATGCAACAGTATCACTCCCATCTCTTTACTCAACAGGTGTTGCCTACAGAAAATCTCGTTTTGTTTGCAATGCTCGTGAAGCATTAAATGAAGTTGGAGTAGTGACTGACGCAAACTGGAATGACCTTGTCCTTGCAAGTGAAATCCCTGTGCTGGTAGATTTTTGGGCATCATGGTGTGGTCCATGCAGGATGATAGCGCCTATTCTCGACGAGTTAGCGAAAGAATATGCTGGAAAAATTGCTTGCTACAAGCTCAACACAGATGATTGTCCAAACATAGCAACAAAGTATGGCATCAGAAGCATACCAACTGTTCTATTTTTCAAAAATGGAGAGAAGAAAGAAAGTGTAATTGGTGCAGTTCCCAAGTCTACTCTGTCCGCAACACTGGAAAAATATATTGAAGCATGA 540 0.413 MALENCLRVSTARPHCLPPLFSSSREKLVFSAQRGGFKKSVQNATVSLPSLYSTGVAYRKSRFVCNAREALNEVGVVTDANWNDLVLASEIPVLVDFWASWCGPCRMIAPILDELAKEYAGKIACYKLNTDDCPNIATKYGIRSIPTVLFFKNGEKKESVIGAVPKSTLSATLEKYIEA 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02230 179 PANTHER THIOREDOXIN M-TYPE PROTEIN 36 177 - -
Car05g02230 179 SUPERFAMILY Thioredoxin-like 61 177 IPR036249 -
Car05g02230 179 PRINTS Thioredoxin family signature 93 101 - -
Car05g02230 179 PRINTS Thioredoxin family signature 101 110 - -
Car05g02230 179 PRINTS Thioredoxin family signature 141 152 - -
Car05g02230 179 Pfam Thioredoxin 74 174 IPR013766 -
Car05g02230 179 ProSitePatterns Thioredoxin family active site. 94 112 IPR017937 -
Car05g02230 179 CDD TRX_family 80 174 - -
Car05g02230 179 TIGRFAM thioredoxin: thioredoxin 78 176 IPR005746 GO:0015035
Car05g02230 179 ProSiteProfiles Thioredoxin domain profile. 37 179 IPR013766 -
Car05g02230 179 PANTHER GEO12009P1 36 177 - -
Car05g02230 179 Gene3D Glutaredoxin 74 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02230 Car-Chr5 67514390 67516040 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02230 K03671 - gmx:100500292 295.819