Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02223 ATGGGTGCAGTTTGTTGGCCATATTTTGATCCTGAGTATGAGAATTTCAGCAATAGAATTAACCCTCCAAGGGTTTCCGTGGACAATGCTAGTTGCCATAATTGTACTCTAATCAAGTTTGATAGTGTTAACAAACCTGGAATTCTGCTGGAAGTTGTTCAAATATTGACAGACCTTGACTTCATAATTACCAAAGCTTACATATCTTCTGATGGAGGATGGTTCATGGATGTATTTCATGTCACGGATCAGCGAGGAAAAAAGATAACAGATAGCAAAACCATTGACCTCATTGAAAAGGCTCTAGGACCGAAGAGCCAGAGCACAGAAGGGGTGAAGAATTGGTCAGGCAAACGGGTCGGGGTGCATTCTGTTGGCGATCATATAGCCGTTGAGCTAATCGGGAGAGACCGTCCTGGTCTATTGTCTGAGATCTCAGCTGTTCTTGCCAACCTCCACTTTAACGTAGCTGTAGCGGAAGCTTGGACTCATAACAGGCGAATAGCTTGCATCCTTTATGTCAATGACGGTACGAGACAAGCTGTGGATGATCCAAAAAGATTATCTGTTATGGAGGAGCAACTCAATAATGTCTTACGTGGATGTGAGGATGGTGATAAAATTGCTAGTAGGACTAGTCTCTCCATGAGTTTCACCCATATTGATAGGCGGCTCCACCAAATGTTGTTTGCTGATCGGGATTATGAAAGTTGTGGAGTAACGACAGACAGTGTCTGTGCTCCCTCTTTCAGGCCAAAAATCGCAATAGAGTGTTGCGAGGAAAAAGGGTACTCGGTGGTTAGTGTCAGGTGCAGAGATCGTGCAAAACTCATGTTTGACATTGTTTGCACCCTTACTGATATGCAATATGTTGTTTTCCATGCCACAATCTCATCAGATGGCCCTTATGCATCCCAGGAATATTTTATTCGGCACATGGACGGATGCACACTTGATACAGAAGGAGAGAAAGAAAGGGTCATCAAATGCATTGAAGCTGCTATTCAAAGAAGAGTAAGCGAGGGTGTGAGCCTTGAGCTTTGTGCAAAGGATAGAGTGGGATTGCTGTCTGAAGTAACAAGGATTCTAAGAGAGAATGGCTTAACAGTTTGTAGGGCAGGTATATCAACAAAAGGAGAGCAAGCACTTAATGTCTTCTATGTTAGGGATGCATCAGGCAACACATTGGACATGAAGACTATAGAAGCACTTTGTAAAGAAATAGGCAAAACAATGATGATAGATGTGAAGAAGGTACCAGCATATGACAAAACACATGAGACACGAGGATGGGCTAAAACTAGCTTCTTCTTTGGTAACTTGTTGGAAAGGTTTTTGGCTTGA 1344 0.4278 MGAVCWPYFDPEYENFSNRINPPRVSVDNASCHNCTLIKFDSVNKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQRGKKITDSKTIDLIEKALGPKSQSTEGVKNWSGKRVGVHSVGDHIAVELIGRDRPGLLSEISAVLANLHFNVAVAEAWTHNRRIACILYVNDGTRQAVDDPKRLSVMEEQLNNVLRGCEDGDKIASRTSLSMSFTHIDRRLHQMLFADRDYESCGVTTDSVCAPSFRPKIAIECCEEKGYSVVSVRCRDRAKLMFDIVCTLTDMQYVVFHATISSDGPYASQEYFIRHMDGCTLDTEGEKERVIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCRAGISTKGEQALNVFYVRDASGNTLDMKTIEALCKEIGKTMMIDVKKVPAYDKTHETRGWAKTSFFFGNLLERFLA 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02223 447 SUPERFAMILY ACT-like 32 106 IPR045865 -
Car05g02223 447 CDD ACT_ACR_4 342 413 - -
Car05g02223 447 Pfam ACT domain 37 85 IPR002912 -
Car05g02223 447 Pfam ACT domain 131 198 IPR002912 -
Car05g02223 447 ProSiteProfiles ACT domain profile. 130 211 IPR002912 -
Car05g02223 447 CDD ACT_ACR_3 264 338 - -
Car05g02223 447 ProSiteProfiles ACT domain profile. 344 421 IPR002912 -
Car05g02223 447 SUPERFAMILY ACT-like 340 410 IPR045865 -
Car05g02223 447 Gene3D - 128 200 - -
Car05g02223 447 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 447 IPR040217 -
Car05g02223 447 CDD ACT_ACR_1 35 105 - -
Car05g02223 447 Gene3D - 339 419 - -
Car05g02223 447 ProSiteProfiles ACT domain profile. 37 114 IPR002912 -
Car05g02223 447 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 4 447 - -
Car05g02223 447 SUPERFAMILY ACT-like 125 200 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02223 Car-Chr5 67432566 67437667 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02223 - - gmx:100797293 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02934 04 56517008 56525158 Car05g02223 05 67432566 67437667 PCT