Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02208 ATGGCTAACAATGCAGCTGCCTGTGCTGAGAGAGCAACCAGTGACATGCTCATTGGTCCAGATTGGGCAATCAATATAGAATTGTGTGATATCATTAATATGGATCCTAGGCAAGCAAAGGATGCATTAAAGATACTTAAGAAGCGTCTGGGCAGTAAAAATCCCAAAATACAGCTGCTGGCTCTTTTTGTACTTGAGACCCTTAGTAAAAATTGCGGTGAAAGTGTATTTCAGCAGATCATTGAGCGTGATATATTGCATGAAATGGTTAAGATAGTAAAGAAGAAGCCGGACTTAAGTGTGAGAGAAAAGATACTGATTTTAATTGACGCATGGCAAGAGGCTTTTGGAGGTCCAACAGGAGTTTTTCCCCAATACTATGCAGCATATAATGAACTAAAGGCTGCTGGAGTTGAATTTCCACCAAGAGAAGAAAATAGCGTGCCATTCTTCACGCCTCCTCAAACTCAGCCGATTGTTCATTCTGCCGCAGAATTTGATGATGCTGCTATTCAGGCTTCTCTTCAGTCGGATGCGTCTGACCTTAGTTTACTAGAGATTAAAAATGCTCAAGGACTAGCTGATGTTTTGACGGAAATGCTTAGTGCCTTGAATCCGAAAGATCCCGAGGGCGTGAAGGAGGAAGTGATTGTTGATCTTGTTGACCAGTGCCGTTCTTACCAGAAACGTGTCATGCTTCTTGTGAACAATACTACGGATGAGGAGCTTTTAGGTCAGGGATTGGCACTGAATGACAGCCTTCAGCGAGTACTCCGACAACATGATGATATTGCGAAAGGAACTTCTAATTCAGTTGCAAGAGAAGTAGAAACTCCAGTTCTGCCACTTGTAAATGTAAACCATGAAGATGATGAGTCAGATGATGATTTTGGTCAATTGGCCCATAGGTCATCACGAGATACTCATGTACAGAATCGGAAACCAGCCTATGACAAGGCAGAACCAGCAAGGATAAACTCACTTATTCCCCCACCACCAGCATCAAAGAAGCCGGTCTACTCTGGCACTGGCATGGTTGactatcttagtggagatgcatacaaggcagaaggatcctttgaaaactcagaaCCAACTTCATTTGCAGCTCCTCTTCATTCTAGCTCTAATCCTGCCTCATCAACTATTCCAACAGAGTCTTCACCCCATCCTAATGCCACTAGTACCTCTTCACCAATTTTTAGCAGACAGCCTATATACGATGACCCATCTCCCCCTAAGTCATCAGAACAGCTGCCTCCAGCTCCCTGGGATACACAAGCTCCTGTCGTCATTCCACCCCCACCTTCAAAGTATAATCAGAGACAACAGTTTTTTGAGCAAAAAGGTTCATCTCATTCAAGTAATGGATCAAGTTCATCTCATGAAAGCTTGGTGGGACAAACTCAAAACCTCTCTCTGAATTCTTCATCCACCCCAACCAAAGAACAGAAGCCAGAAGATGCCCTTTTCAAAGATCTAGTTGATTTTGCAAAATCGAAAACCTCTTCATCTTCCAAACCCAATAATAGGTCGTATTGA 1542 0.417 MANNAAACAERATSDMLIGPDWAINIELCDIINMDPRQAKDALKILKKRLGSKNPKIQLLALFVLETLSKNCGESVFQQIIERDILHEMVKIVKKKPDLSVREKILILIDAWQEAFGGPTGVFPQYYAAYNELKAAGVEFPPREENSVPFFTPPQTQPIVHSAAEFDDAAIQASLQSDASDLSLLEIKNAQGLADVLTEMLSALNPKDPEGVKEEVIVDLVDQCRSYQKRVMLLVNNTTDEELLGQGLALNDSLQRVLRQHDDIAKGTSNSVAREVETPVLPLVNVNHEDDESDDDFGQLAHRSSRDTHVQNRKPAYDKAEPARINSLIPPPPASKKPVYSGTGMVDYLSGDAYKAEGSFENSEPTSFAAPLHSSSNPASSTIPTESSPHPNATSTSSPIFSRQPIYDDPSPPKSSEQLPPAPWDTQAPVVIPPPPSKYNQRQQFFEQKGSSHSSNGSSSSHESLVGQTQNLSLNSSSTPTKEQKPEDALFKDLVDFAKSKTSSSSKPNNRSY 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02208 513 PIRSF TOM1 1 513 IPR014645 -
Car05g02208 513 SUPERFAMILY ENTH/VHS domain 8 142 IPR008942 -
Car05g02208 513 Gene3D - 176 274 IPR038425 -
Car05g02208 513 MobiDBLite consensus disorder prediction 360 404 - -
Car05g02208 513 ProSiteProfiles VHS domain profile. 12 141 IPR002014 GO:0035091|GO:0043130
Car05g02208 513 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Car05g02208 513 CDD VHS 10 135 - -
Car05g02208 513 MobiDBLite consensus disorder prediction 285 340 - -
Car05g02208 513 SMART VHS_2 5 137 IPR002014 GO:0035091|GO:0043130
Car05g02208 513 SUPERFAMILY GAT-like domain 145 267 - -
Car05g02208 513 Pfam VHS domain 9 116 IPR002014 GO:0035091|GO:0043130
Car05g02208 513 MobiDBLite consensus disorder prediction 498 513 - -
Car05g02208 513 PANTHER TOM1-LIKE PROTEIN 1 512 IPR044836 GO:0035091|GO:0043130|GO:0043328
Car05g02208 513 Gene3D - 2 158 IPR008942 -
Car05g02208 513 MobiDBLite consensus disorder prediction 295 320 - -
Car05g02208 513 MobiDBLite consensus disorder prediction 437 484 - -
Car05g02208 513 MobiDBLite consensus disorder prediction 358 513 - -
Car05g02208 513 CDD GAT_GGA_like_plant 186 264 - -
Car05g02208 513 PANTHER TOM1-LIKE PROTEIN 4 1 512 - -
Car05g02208 513 Pfam GAT domain 193 267 IPR004152 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02208 Car-Chr5 67324241 67330906 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02208 - - gmx:100792343 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02208 05 67324241 67330906 Car05g02208 05 67324241 67330906 ECH