Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02178 ATGATATCACGCCACTTATTCTTTGTCTGGATAGCATTACTATTTCCCTTCCTTTGTGCAACTGAGGAAGATGCTTCCGCCATCATCTTCACCACACTTGGCAGAGCTTACTACGCTTTCGATATCTATTCCCTCCCAATTCACCTCAACCATTCAACCAACCCTCACCAAGAATTACAAATTACTGACGGTAACTCCGTTAATTTTAACGGCCATTTCCTTTCCAATCAATTCCCCGCCGATCATAACCCGCCTCCTCTTCAACTTGTTTACGTCACTGAGAGAAACGGATTTCCCTCCATATACTACGACGCCGTTTACACAACCACAACTTCAACCTCAAGAAGATCGGCTCTTGAATCTGTTACCGTCACGGATAGAATTCAACTCCCTCTGTTACCTAATCATCTCAAAGACTCTCAACTTTCAGTTTCAATCAAAGATAAACCAAGTGTGACTAGCGATGGTGAGTTTTTGATCTACGTATCAACACATGAGAACCCGGAGGTGCCACGTGTCAGCTGGACAGCCGTTTATTCTACTCACCTCAAATCAGGTCTCACACGAAGACTCACTCCCTACGGTGTAGCTGATTTCAGCCCCTCCCTCTCTCCGTCAGGAACATGGACCGCAGTCGCTTCCTACGGCGGAGCCGGTTGGTCCGGCGAGGTAGAGGATCTCACTACAGACATTTACGTTTTCCTCACTCGAGACGGAACACAGCGACACAAGTTGGTTGAACACGGTGGCTGGCCCTGCTGGGTCGACGATCAAACAATTTACTTTCACCGGAGGGGAAACGACAGTTGGTGGAGTATTTACAGAGTGATTCTATCCGCTGATTCTTCTGACTCAGTCGTCATCGAACGGGTCACATCACCGGGTATACACGCGTTCACACCCGCAACCTCACCGGGAAACCACAACTTCATCGCCGTCGCCACAAGAAGAACTAGCTCAAATTTCCGTCACATCGAGTTATTCGACCTAATTAACAACGAGTTCAAGGAGTTAACTCGTTTCATCTCACCTCAATCTCACCACCTCAACCCGTTTATCTCACCCGATTCAACCCGGATCGGGTACCACAAATGTAGAGGAAAGGAAAGCGTTTATGTCATGAACCGGGACGGTTCAAACCAGCAAAAGGTTTCCAACGCGATGGCGTTCTCAACCGCGTGGGACCGGGTTCGACCCGGTGTAATCTACACAGCAGTTGGAGAAACATTTGCATCGGAGAGCACGGAGGTTGATATTATATCCATTGACGTCGACCGGAACATCGTTAAGAAATTGACCATAGACGGAAAGAACAACGCGTTTCCGTCTCCGTCACCGGACGGAAAATGGATCGTGTTTCGTTCGGGTCGGTCGGGTCATAAGAACCTATACGTAATGGATGCGGTTGAAGGAGAGAAAAAAGGGCTAAGAAGGTTAACGGAGGGTCCATGGACAGATACAATGTGCAATTGGTCTCCTGATGGAGAATGGATAGCTTTTGCATCGGATCGTGATGACCCGGGAAGTGGGAGTTTCGAGTTATATTTGATCCACCCGAATGGAACCGGGTTGAAGAAACTGATTCAAAGCGGGTCGGGTGGGAGAACGAACCACCCGTATTTTAGCCCCGATGGGAAGAGTATTGTTTTTACGTCAGATTATTCGGGTATATCGGCGGAGCCAATTTCTAACCCGCATGCTTATCAGCCTTATGGTGAAATATTCACCGTTAGATTGGATGGTTCGGGTCTAACAAGATTGACGCATAATTCGTATGAAGATGGAACACCTGCTTGGTCACCCAAATATATCAAGCCTGTGAATGTTGAGAGGCCCAAAGGTGGACCTTATTGTTCTTTCGATGATTGCCATTGGCTCAACAACATGCCAAATTACTACAAGGCACAATGCGCTCTGTAA 1920 0.4755 MISRHLFFVWIALLFPFLCATEEDASAIIFTTLGRAYYAFDIYSLPIHLNHSTNPHQELQITDGNSVNFNGHFLSNQFPADHNPPPLQLVYVTERNGFPSIYYDAVYTTTTSTSRRSALESVTVTDRIQLPLLPNHLKDSQLSVSIKDKPSVTSDGEFLIYVSTHENPEVPRVSWTAVYSTHLKSGLTRRLTPYGVADFSPSLSPSGTWTAVASYGGAGWSGEVEDLTTDIYVFLTRDGTQRHKLVEHGGWPCWVDDQTIYFHRRGNDSWWSIYRVILSADSSDSVVIERVTSPGIHAFTPATSPGNHNFIAVATRRTSSNFRHIELFDLINNEFKELTRFISPQSHHLNPFISPDSTRIGYHKCRGKESVYVMNRDGSNQQKVSNAMAFSTAWDRVRPGVIYTAVGETFASESTEVDIISIDVDRNIVKKLTIDGKNNAFPSPSPDGKWIVFRSGRSGHKNLYVMDAVEGEKKGLRRLTEGPWTDTMCNWSPDGEWIAFASDRDDPGSGSFELYLIHPNGTGLKKLIQSGSGGRTNHPYFSPDGKSIVFTSDYSGISAEPISNPHAYQPYGEIFTVRLDGSGLTRLTHNSYEDGTPAWSPKYIKPVNVERPKGGPYCSFDDCHWLNNMPNYYKAQCAL 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02178 639 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 369 622 - -
Car05g02178 639 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 26 367 - -
Car05g02178 639 Pfam WD40-like Beta Propeller Repeat 436 465 IPR011659 -
Car05g02178 639 Pfam WD40-like Beta Propeller Repeat 536 553 IPR011659 -
Car05g02178 639 Pfam WD40-like Beta Propeller Repeat 477 515 IPR011659 -
Car05g02178 639 Gene3D - 409 472 - -
Car05g02178 639 SUPERFAMILY DPP6 N-terminal domain-like 150 386 - -
Car05g02178 639 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 26 367 - -
Car05g02178 639 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 369 622 - -
Car05g02178 639 Gene3D - 473 613 IPR011042 -
Car05g02178 639 SUPERFAMILY Tricorn protease N-terminal domain 301 601 - -
Car05g02178 639 Gene3D - 135 384 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02178 Car-Chr5 67025182 67028572 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02178 - - mtr:MTR_3g088425 1047.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02178 05 67025182 67028572 Car05g02178 05 67025182 67028572 ECH