Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02169 ATGAAATCATTGAAATTGGAAGCCATGCAAGTGACATCGATGACGAAAAGAAAAAGAACCCTCAAATCGCCGCTGCCTCCTCCTCCTTCAACACCTCCAACGCCGCAAACCAAAACCCGCCACTCAACTAACATCTCCAAATCTCGTCCGTGGGTCCCACTCAATATCTCTCGAGAAGAACTCTCTTTACCCCTCACATTCCCCACCGGCCAAACCTTCCGCTGGAAAAACACCGCTCCTTTCCAATACACAGGTGTCGTTGGGTCCCACCTCTTATCCCTCAAACACCTCCAAAACGGTGACGTCTCATACTCCCTTCACACCCAATCCAACAACGACGATGCCAAAACGGCATTACTCGATTTCTTGAACGCAGACGTTTCTCTCGCTGACACGTGGAAGGTGTTTTCCGCTTCCGATTCAAGATTCGCGGAATTGGCGCATCATTTGGGTGGTGCTAGGGTTTTGAGACAAAATCCTTTTGAGTGCTTGATTCAGTTCATGTGTTCTTCCAATAACCACATTAGTAGAATCACTAAAATGGTGGATTACGTTTCGTCTCTAGGAACTTATTTAGGTCATGTTGAAGGCTTTGATTTCCACGCTTTCCCCACTCTTCATCAGCTTTCATTGGTATCTGAACAACAACTCAGAAACGCTGGTTTTGGTTACAGGGCTAAGTATATAATTGGCACGGTCAATGTTTTGCAATCAAAACCTGAAGGTGGAGAAGAATGGCTTCATTCTCTTCGCAAATTGGATCTTGAAGATGTTATATCTGCACTTTCCACGTTACCTGGAGTGGGTCCTAAAGTGGCTGCTTGCATAGCTCTCTACTCACTTGATCAACACCATGCAATTCCTGTTGACACTCATGTCTGGCGAATTGCCCAAAAGCATCTTTTACCTGAGCTTGCAGGTTCAAAGTTGACACTGAAGCTTTGCAATCGTGTTGCAGAGGCTTTTGTAACAAAATATGGTAAATATGCTGGCTGGGCTCAAGCTGTTTTATTTATTGCCGAGTTGCCTTCACAAAAGGCCCTCCTACCTTTAAATTTGAGGACTACCAAACAGGGTAATCCCACAAAGAGAGAAAACAGTGTAGAAGAATTTGATTGA 1119 0.4477 MKSLKLEAMQVTSMTKRKRTLKSPLPPPPSTPPTPQTKTRHSTNISKSRPWVPLNISREELSLPLTFPTGQTFRWKNTAPFQYTGVVGSHLLSLKHLQNGDVSYSLHTQSNNDDAKTALLDFLNADVSLADTWKVFSASDSRFAELAHHLGGARVLRQNPFECLIQFMCSSNNHISRITKMVDYVSSLGTYLGHVEGFDFHAFPTLHQLSLVSEQQLRNAGFGYRAKYIIGTVNVLQSKPEGGEEWLHSLRKLDLEDVISALSTLPGVGPKVAACIALYSLDQHHAIPVDTHVWRIAQKHLLPELAGSKLTLKLCNRVAEAFVTKYGKYAGWAQAVLFIAELPSQKALLPLNLRTTKQGNPTKRENSVEEFD 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02169 372 Pfam 8-oxoguanine DNA glycosylase, N-terminal domain 54 164 IPR012904 GO:0003684|GO:0006289|GO:0008534
Car05g02169 372 PANTHER 8-OXOGUANINE DNA GLYCOSYLASE 50 358 - -
Car05g02169 372 Gene3D Hypothetical protein; domain 2 159 283 - -
Car05g02169 372 PANTHER N-GLYCOSYLASE/DNA LYASE 50 358 - -
Car05g02169 372 SMART endo3end 169 341 IPR003265 GO:0006284
Car05g02169 372 CDD ENDO3c 161 339 IPR003265 GO:0006284
Car05g02169 372 MobiDBLite consensus disorder prediction 1 19 - -
Car05g02169 372 MobiDBLite consensus disorder prediction 1 46 - -
Car05g02169 372 Gene3D - 133 342 IPR023170 -
Car05g02169 372 SUPERFAMILY TATA-box binding protein-like 43 158 - -
Car05g02169 372 SUPERFAMILY DNA-glycosylase 159 340 IPR011257 GO:0003824|GO:0006281
Car05g02169 372 Pfam HhH-GPD superfamily base excision DNA repair protein 165 300 IPR003265 GO:0006284
Car05g02169 372 Gene3D - 37 123 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02169 K03660 - gmx:100789749 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02169 05 66951920 66954643 Car05g02169 05 66951920 66954643 ECH