Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02168 ATGGAGAAGTGGTGGTTGCGGTGTTGTTCTTTATTACTATTATTACTCGTAGTAATTTTTACGGCGTCTTTTGGCACCGTCCACGGTGGCAATGTCACCTACGACAAAACATCATTAGTTATTAACGGCGAACATAAAATCCTCTTCTCCGGTTCAATTCACTATCCTCGTAGCACTCCTCAGATGTGGCCTAATTTAATTGCCAAAGCCAAGGAAGGAGGCTTAGATGTCATACAAACTTATGTGTTTTGGAATCTTCACGAACCTCAACTTGGTCAGTATGAGTTTAGTGGAAGGTTTGATTTAGTGGGATTCATTAAGGAAATTCAAGCACAAGGTTTATATGTGACACTTCGAATTGGACCTTACATTGAGAGTGAATTCACTTATGGGGGTCTACCATTATGGTTACATGATATTCCGGGAATTGTATTTAGATCTAACAATGATCAATTCAAGTATCACATGCAAAGATTCACTACCAAAATAGTCAACATGATGAAATCAGCCAATCTTTATGCTTCACAAGGAGGGCCTATCATACTATCCCAGATTGAGAATGAATATGGTAACATAGGAAGGGCGTTTCAAGAGAACGGAGTGACCTATATGCACTGGGCTGCTCAAATGGCCGTGGGACTCCAAACGGGTGTGCCTTGGGTAATGTGCAAACAAGACGATGCTCCGGATCCAGTGATCAACACATGCAATGGCATGGAATGTGGAACAAGATTTAAGGGGCCGAACTCGCCTAACAAACCTTCACTATGGACAGAGAATTGGACTAGTTTTTATCAAGCCTTTGGTGGAGTACCATACCTGAGGTCAGCTAAAGACATTGCATATAATGTTGCCTTGTTCATTGCAAAGAAAGGAAGCTATGTTAATTACTACATGTACCATGGAGGAACCAATTTTGATAGAATGGCCTCTGCTTTCATAACAACAGCTTATTATGATGAAGCTCCACTAGATGAATATGGTTTGGTTAGGCAACCAAAATGGGGACATCTTAAGGAGCTACATGCTGCAATCAAGTCATGTTCACAAGCTCTACTTTATGGAACTCAAACCACATTCAGCTTAGGCTCACAACAACAAGCTTATGTTTTCAGAAGCTCCACAGAATGTGCTGCCTTCTTGGAAAATAGTAGAAATGGGGATGTCACAGTCCAATTTCAAAATATTCCTTATCAATTGCCCTCGAAATCGATCAGTATTCTACCAGACTGCAAGAATGTAGCCTTCAACACTGCCAAGGTGAATGTACAGAATAATGCCAGAGCAATGAAAACACAATTACAGTTCAATTCAGCTGAAAATTGGAAAGTGTATACAGAAGCCATCCCTAATTTTGACGATACCTCATTAAGAGCAAACACATTATTAGATCAAATCGGCACAGCAAAAGATACATCTGATTATATGTGGTACACTTTCAGATTTAATGGAAACTCTCCTAATGCTCAATCTGTTCTTAGTATATACAGCCAAGGACATGTTTTGCATTCTTTCATCAATGGAGTTTTAATAGGTTCAGCACATGGAAGTCATAACAATATGTATGTTGCGATGGAGAACAATGTCAATCTGATAAATGGGATGAACAACATCTCCATACTTAGTGCAACAGTTGGATTGCCGAACTCGGGAGCATATCTAGAAAGGAGAGTTGCTGGTTTGCGTCAAGTGAAAGTTCAAGGAAGAGATTTCACTAGTTACTCGTGGGGATATCAGGTTGGATTGTTAGGAGAAACAATGCAAATCTATACAGCCACTGGATCAAGTAAAGTTCAGTGGCAAAGTTTTCAAAGCTCTACTAAACCACTGACATGGTATCAGACCACATTTGATGAACCAGCAGGCAATGACCCTGTAGTGCTTAACCTTGGTTCTATGGGAAAGGGACTCACTTGGGTTAATGGCCAAGGTATTGGCAGATATTGGATATCTTTCCACACACAAAAAGGGACTCCTTCACAACAATGGTATCACATACCTCGTTCCCTCCTAAAATCTACCGGCAACCTACTGGTTATACTAGAAGAAGAAACTGGGAACCCCTTAGGAATCACTCTAGACACAGTATACATCGCAGAAGATCAAGCATCATGA 2115 0.4047 MEKWWLRCCSLLLLLLVVIFTASFGTVHGGNVTYDKTSLVINGEHKILFSGSIHYPRSTPQMWPNLIAKAKEGGLDVIQTYVFWNLHEPQLGQYEFSGRFDLVGFIKEIQAQGLYVTLRIGPYIESEFTYGGLPLWLHDIPGIVFRSNNDQFKYHMQRFTTKIVNMMKSANLYASQGGPIILSQIENEYGNIGRAFQENGVTYMHWAAQMAVGLQTGVPWVMCKQDDAPDPVINTCNGMECGTRFKGPNSPNKPSLWTENWTSFYQAFGGVPYLRSAKDIAYNVALFIAKKGSYVNYYMYHGGTNFDRMASAFITTAYYDEAPLDEYGLVRQPKWGHLKELHAAIKSCSQALLYGTQTTFSLGSQQQAYVFRSSTECAAFLENSRNGDVTVQFQNIPYQLPSKSISILPDCKNVAFNTAKVNVQNNARAMKTQLQFNSAENWKVYTEAIPNFDDTSLRANTLLDQIGTAKDTSDYMWYTFRFNGNSPNAQSVLSIYSQGHVLHSFINGVLIGSAHGSHNNMYVAMENNVNLINGMNNISILSATVGLPNSGAYLERRVAGLRQVKVQGRDFTSYSWGYQVGLLGETMQIYTATGSSKVQWQSFQSSTKPLTWYQTTFDEPAGNDPVVLNLGSMGKGLTWVNGQGIGRYWISFHTQKGTPSQQWYHIPRSLLKSTGNLLVILEEETGNPLGITLDTVYIAEDQAS 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02168 704 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 177 189 IPR019801 GO:0004553|GO:0005975
Car05g02168 704 Gene3D - 572 701 - -
Car05g02168 704 SUPERFAMILY Galactose-binding domain-like 405 561 IPR008979 -
Car05g02168 704 SUPERFAMILY (Trans)glycosidases 29 348 IPR017853 -
Car05g02168 704 PANTHER BETA-GALACTOSIDASE 13 699 - -
Car05g02168 704 Gene3D Glycosidases 27 349 - -
Car05g02168 704 Pfam Beta-sandwich domain in beta galactosidase 352 421 IPR041392 -
Car05g02168 704 PANTHER BETA-GALACTOSIDASE RELATED 13 699 IPR001944 GO:0004553|GO:0005975
Car05g02168 704 SUPERFAMILY Galactose-binding domain-like 575 697 IPR008979 -
Car05g02168 704 PRINTS Glycosyl hydrolase family 35 signature 42 59 IPR001944 GO:0004553|GO:0005975
Car05g02168 704 PRINTS Glycosyl hydrolase family 35 signature 63 81 IPR001944 GO:0004553|GO:0005975
Car05g02168 704 PRINTS Glycosyl hydrolase family 35 signature 118 137 IPR001944 GO:0004553|GO:0005975
Car05g02168 704 PRINTS Glycosyl hydrolase family 35 signature 175 190 IPR001944 GO:0004553|GO:0005975
Car05g02168 704 PRINTS Glycosyl hydrolase family 35 signature 256 271 IPR001944 GO:0004553|GO:0005975
Car05g02168 704 PRINTS Glycosyl hydrolase family 35 signature 293 308 IPR001944 GO:0004553|GO:0005975
Car05g02168 704 PRINTS Glycosyl hydrolase family 35 signature 312 328 IPR001944 GO:0004553|GO:0005975
Car05g02168 704 PRINTS Glycosyl hydrolase family 35 signature 608 622 IPR001944 GO:0004553|GO:0005975
Car05g02168 704 PRINTS Glycosyl hydrolase family 35 signature 635 651 IPR001944 GO:0004553|GO:0005975
Car05g02168 704 Pfam Glycosyl hydrolases family 35 38 344 IPR031330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02168 Car-Chr5 66943148 66951219 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02168 11 699 Glycoside Hydrolase AT5G63800 58.798 0.0 865
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02168 - - gmx:100789220 1185.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02168 05 66943148 66951219 Car05g02168 05 66943148 66951219 ECH