Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02164 ATGAAATTTCAGAACTCTTTGTTTTTCTCGGTGATGATAATATTCTTATTAACCGTTATAGTTCTGGAACGCTTCACGGATTCAATCGCCGTGTATATACCTTCCGCCGCTTACGACCACGTTTTGTTCTCCGATCGGAGAAGCTGCGATCAGGAGAACAAGCAGTTAACGATCTTTCCGTGCAAAAACGAGACGCGGAGGAGAACGATGGAGACGAGCTGCGACGTGTGGAGCGAAGCGTGCTCGGAGGCGGTGTTGAGCATAGCACGGCGGCCGGAGACGGCGGAGTGGTTGAAAAGTGTTCGGAGGAAGATCCATGAAAATCCGGAGTTGGCTTTTGAGGAAATCGAGACGAGCCGTTTGATAAGAGAGGAGTTGGATCTGATGGAAGTTAGTTATCGGTTCCCTCTCGCGAAAACCGGTATTCGTGCTTGGATCGGTACTGGGGGTCCGCCTTTTGTTGCAGTTAGAGCTGACATGGATGCACTTCCCATCCAGGAAGGGGTGGAATGGGAGTACAAGTCTAAAGTTGCCGGCAAAATGCACGCTTGTGGGCACGACGCACATGTGGCGATGCTTATTGGTGCTGCCAAGATCTTGAAAACTCGAGAGCATTTATTAAAGGGAACCGTTATTCTGTTATTCCAGCCAGCAGAAGAAGCTGGTAATGGCGCAAAGCGAATGATACAAGATGGTGCTTTGGATGATGTGGAGGCTATATTTGCAGTTCATGTATCCCATGAACATCCAACTTCCATAATTGGTTCAAGGCCTGGACCCCTGTTGGCTGGCTGTGGATTTTTCAGAGCCGTAATTAGTGGAAAAAGAGCCCTTGCTGCAAATCCTCACCACACTGTTGATCCAGTTTTGGCTGCTTCAGCTGCAGTTATCAGCTTACAAGGCATTGTCTCCCGCGAATCAAACCCATTAGATTCACAGGTTGTGTCTGTAACTTCGTTTAATGGAGGCAATAGTTATGACATGATACCGGATGCAGTGGTCATCGGCGGGACCTTCAGAGCGTTTTCTAACACCAGTTTTTACCAGCTGCTAGACAGAATACAGCAGGTGATTGTGGAACAAGCTAGTGTCTACAGGTGTTTTGCAGAAGTTGACTTCTTTGAAAAGGAGTACACTATTTATCCTCCCACGGTTAATGATGACCAAATGTATGAACATGTGAAGAAGGTGGTTCCTTCAGCTTTCTTCTATATAGGGATAAGGAATGAAACACTAGGGTCTACTCACACGGGACACTCTCCACATTTCATGATTGATGAAGATGCTCTACCAATAGGAGCTGCTGTTCACGCCGCCATTGCAGAAAGGTACCTCAATGAACATGGTTGA 1350 0.4711 MKFQNSLFFSVMIIFLLTVIVLERFTDSIAVYIPSAAYDHVLFSDRRSCDQENKQLTIFPCKNETRRRTMETSCDVWSEACSEAVLSIARRPETAEWLKSVRRKIHENPELAFEEIETSRLIREELDLMEVSYRFPLAKTGIRAWIGTGGPPFVAVRADMDALPIQEGVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKTREHLLKGTVILLFQPAEEAGNGAKRMIQDGALDDVEAIFAVHVSHEHPTSIIGSRPGPLLAGCGFFRAVISGKRALAANPHHTVDPVLAASAAVISLQGIVSRESNPLDSQVVSVTSFNGGNSYDMIPDAVVIGGTFRAFSNTSFYQLLDRIQQVIVEQASVYRCFAEVDFFEKEYTIYPPTVNDDQMYEHVKKVVPSAFFYIGIRNETLGSTHTGHSPHFMIDEDALPIGAAVHAAIAERYLNEHG 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02164 449 PANTHER PEPTIDASE M20 FAMILY MEMBER 396 448 IPR017439 GO:0016787
Car05g02164 449 Gene3D Zn peptidases 100 397 - -
Car05g02164 449 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 396 448 - -
Car05g02164 449 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 37 397 - -
Car05g02164 449 SUPERFAMILY Bacterial exopeptidase dimerisation domain 264 373 IPR036264 -
Car05g02164 449 PANTHER PEPTIDASE M20 FAMILY MEMBER 37 397 IPR017439 GO:0016787
Car05g02164 449 Gene3D - 263 381 - -
Car05g02164 449 SUPERFAMILY Zn-dependent exopeptidases 93 447 - -
Car05g02164 449 TIGRFAM amidohydrolases: amidohydrolase 100 397 IPR017439 GO:0016787
Car05g02164 449 CDD M20_IAA_Hyd 98 445 IPR044757 GO:0009850|GO:0016787
Car05g02164 449 Pfam Peptidase family M20/M25/M40 155 442 IPR002933 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02164 Car-Chr5 66910520 66918572 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02164 K21604 - gmx:100785666 704.901