Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02160 ATGGGCTGCGGGGGCTCCAAGGTGGAGGAGTTCCCCGTGGTAACTCTCTGCAGAGAACGAAAACAGTTTCTAAAAAACGCGTCCGAACAACGCTATGCTCTCGCCGCTGCACACCTCTCTTATTTACAATCCCTAAGAGATATCGGAAACGCTCTTCGTAAATTCTCCGATCAAGATCTCTTCCTTCCAACAACTTCGACTCCTTCTTCATCTTCGATTTCTTCCCCTGTTCTCACATTGCCTTCTCGTCAAGGTAAATCCAAAAACAGTAACAGTAACATTAACAGTAAAAACCACATTTCATCTTCTTCTTCACCTTCTCATGATGGCTCTCACTTGCATCTTTCTTCTGGATCTGAGTTAAGTTCTCCTGCTTCTCATCATGCTCACGATCATCGAACACCCGAACCTGATTCAGAACCAGAACACGAGCCACCTTCTTATTATCAAAATCCATATCCTTATCCCCATTCCCAAGATTGGACTCAACCTGGAGTTAACACTTACGCTTATTACATGAAGAAATCTGCACCTCATGGAAAATCAATGGTTTACAAAGAACCGGAGAGCCACGTGGCAGCATCTGGACAATGGACTGCTGGTTCTCCTTTACCTTATGGTTATGGTTACTCTGGTGTTAACAGTAACGCCGGCGGTGGTTTCTTTGGTTTTCCGGCGGGGCCTTCTTCATTTccgccgcctccacctccagctccaccttcgccgccGAGAGTCACTACTTGGGATTTTCTCAATTTTTTCGATTCTGTGGATAGCGGTTATTCCGGTTATGGTTATGGAAATTACGGTTTAGCGTCGAGTGCGAGTAGTCCTGATTCGAAGGAAGTGAGAGAGAGAGAAGGGATTCCTGAACTGGAAGACGAAACGGAGCAGGAAACGGTGAAGGAGATTCGTCATGAGAAGAAGAAAAAAGTGGGGGACAAGGAAGAGGTTTTTAAGGGTAGAGATTTTGGTGAAGGTACTTCAAATTCGAAGGAGGTGCCATTGCAACAAGTGAGTAGTAGTGAGGGAAGTTCCAAAACGGTGCGGTTTCATAGTAGCGACGGCGGTGGTGGTTCGATTTCTTCTCATGAAAAAACGAGTCCTGAGAGTGTTGTTTCTAAAGGGTCTCCTAGGAAGAAAGGGGTGAGTTTTGAGATTGATGGTAATGAAGATGATAATGTTACTACTGTGGAGATTGATGTTGAGTCTTCTATGTTGAGTAGTATAACTACTTTGTCTCCACATGGAACTAGGGATCTTAAAGAGGTTGTAAGGGAAATTAGAGATGAGTTTGAGATTGCTTCTAATCATGGAAAAGAGGTTGCATTTCTTCTCGAGGTTTGCAAACCACCTTATCGACCAAGGCTTGCTGCATTTAGAGCTATCTTATTGAGGATCTTGCAGATTCTTGCACCTTCTAGGTCACCTTTGAATCCGCCATCTGCCCCACCAGTACAATTTTCCTCTAGGACAATGAAATTGGCAAAAGCATACTGCGGGGAACCAGAGAAAGAGTTAAAACCTATTCCGGAAAACCTTTCATCTACATTGGAGAAACTTTATGAATGGGAAAAGAAATTGTACAAGGAAGTTAAGGATGAAGAGAGATTAAGAGCTATTTACGAGAAACAATACAAGCGATTGAAAGCATTGGATAATCGAGGAGCTGAAGCTACTAAAATAGATGCTACTGAGGCATCAATAAGAAAGTTGCTAACAAAATTAAACATTTGTATCAGAAGTGTTGAAACTATATCAGGGAGGATACAAAAATTGAGGGATGAAGAATTGCAGCCTCAGCTTGCAGCCCTAATTAACGGATTGATAAGAATGTGGAAATTCATGCTCCAATGCCACCAGAAACAGTTCCATGCTATCATGGACAGTAAAACTCAATCTCTCAAGTTAAACACTGGTTTGCAAGGAGATGAAGGTTTGAAAGCCATTAACGAACTCGAAAGGGAGCTTCTGAATTGGTGCAGTCAGTTCAACAATTGGGTTAGGACTCAAAAATCTTATGTTGAAAATTTGAATGGGTGGCTCATAAGGTGCCTTCTTGATGAACCTGAAGAAACAGCTGATGGTGTTGTCCCTTTCTCTCCAAGTAGGATTGGAGCTCCACCAGCTTTCATAATCTGCAATGATTGGCATCAAGCAATGAATAGAATTTCCGAAAGAGGGGTGGCAGATGCTATGGGCGAATTTGCCCAAAAACTACACGAGCTATGGGAGAGACAAGATGAGGAACAAAGGCGTAAAATCAGGGCAGAGTATCTCACAGAGGATTTTGAGAAACAACTTAGAACTTTGCGCACCGAAATGGCAGGCTCGGAACATGAGCACGACAAAGTTTCAGGGAAGACTACATTGTCGAAGTTTACTTCTGATAGTGGTATTTCGCCACTGGATGATCTTAAGGTGGATTTAGACTCTATGAAGAAGAGATTGCATGAAGAGAGGGCCAAACATAAAGAAGCCGTTAAACTTGTCCGCGATGCAGCTTCTAACAGTTTACAAGGTGGTTTGATTCCCATTTTTAAGACATTAGAAAGTTTCACTTCGGAGGTGGTGAAAGCTCATGAGCAAGTCAGACTTCAAAATGCCACAGCTACGTAG 2619 0.4204 MGCGGSKVEEFPVVTLCRERKQFLKNASEQRYALAAAHLSYLQSLRDIGNALRKFSDQDLFLPTTSTPSSSSISSPVLTLPSRQGKSKNSNSNINSKNHISSSSSPSHDGSHLHLSSGSELSSPASHHAHDHRTPEPDSEPEHEPPSYYQNPYPYPHSQDWTQPGVNTYAYYMKKSAPHGKSMVYKEPESHVAASGQWTAGSPLPYGYGYSGVNSNAGGGFFGFPAGPSSFPPPPPPAPPSPPRVTTWDFLNFFDSVDSGYSGYGYGNYGLASSASSPDSKEVREREGIPELEDETEQETVKEIRHEKKKKVGDKEEVFKGRDFGEGTSNSKEVPLQQVSSSEGSSKTVRFHSSDGGGGSISSHEKTSPESVVSKGSPRKKGVSFEIDGNEDDNVTTVEIDVESSMLSSITTLSPHGTRDLKEVVREIRDEFEIASNHGKEVAFLLEVCKPPYRPRLAAFRAILLRILQILAPSRSPLNPPSAPPVQFSSRTMKLAKAYCGEPEKELKPIPENLSSTLEKLYEWEKKLYKEVKDEERLRAIYEKQYKRLKALDNRGAEATKIDATEASIRKLLTKLNICIRSVETISGRIQKLRDEELQPQLAALINGLIRMWKFMLQCHQKQFHAIMDSKTQSLKLNTGLQGDEGLKAINELERELLNWCSQFNNWVRTQKSYVENLNGWLIRCLLDEPEETADGVVPFSPSRIGAPPAFIICNDWHQAMNRISERGVADAMGEFAQKLHELWERQDEEQRRKIRAEYLTEDFEKQLRTLRTEMAGSEHEHDKVSGKTTLSKFTSDSGISPLDDLKVDLDSMKKRLHEERAKHKEAVKLVRDAASNSLQGGLIPIFKTLESFTSEVVKAHEQVRLQNATAT 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02160 872 Coils Coil 761 781 - -
Car05g02160 872 Coils Coil 532 552 - -
Car05g02160 872 MobiDBLite consensus disorder prediction 64 124 - -
Car05g02160 872 MobiDBLite consensus disorder prediction 298 327 - -
Car05g02160 872 MobiDBLite consensus disorder prediction 272 390 - -
Car05g02160 872 Coils Coil 803 823 - -
Car05g02160 872 MobiDBLite consensus disorder prediction 64 160 - -
Car05g02160 872 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Car05g02160 872 MobiDBLite consensus disorder prediction 125 143 - -
Car05g02160 872 PANTHER UNCHARACTERIZED 1 869 - -
Car05g02160 872 MobiDBLite consensus disorder prediction 330 374 - -
Car05g02160 872 PANTHER FAMILY PROTEIN, PUTATIVE (DUF630 AND DUF632)-RELATED 1 869 - -
Car05g02160 872 Pfam Protein of unknown function (DUF632) 421 741 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02160 Car-Chr5 66868990 66874008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02160 1 68 Acyl Lipid Metabolism Gene Families AT2G27090 45.946 1.39e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02160 - - aprc:113852495 1065.83