Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02148 ATGGCTCAAACCATGTTGCTCATGTCTAGTGTCTCTAGTACCTATTCCGTCGATTTGAAGAAAGACCCTTTGCTCCAATTACAGTGTCAAAGATTGAGGCCTAAATTCTCTGATATTTCTTTCAACCCACTTAATTCTAATTCTAAGTCTTTTTCGTCACGCACATTCACAACTCTCGCTCTCTTTAAATCAAAGGCCAAAGCCCCTCCTAAGGTTGTAAAGCCAAAACCAAAGGTTGAAGATGGTGTGTTTGGAACTTCTGGAGGATTTGGTTTCACTAAGCAGAACGAACTCTTTGTGGGTCGTGTTGCTATGATCGGTTTTGCAGCATCAATATTGGGAGAAGCAGTAACTGGGAAAGGAATTCTAGCACAATTGAATCTGGAAACTGGAATTCCAATTTATGAAGCTGAGCCACTTCTTCTATTTTTCATTATTTTCACATTGCTAGGAGCCATTGGTGCTCTAGGTGATCGTGGTAAATTTGTTGATGATGAGCCTAATACTGGAGGTGTTATTCCTCCCGGTAAAGGCTTTAGATCAGCTCTTGGTCTCAGTGAAGGAGGTCCTTTATTTGGATTCACAAAATCGAACGAGTTGTTTGTTGGAAGATTGGCTCAATTGGGATTTGCTTTCTCTTTGATTGGAGAAATTATTACTGGAAAGGGAGCTCTAGCACAACTCAACATTGAGACAGGGGTACCAATCAATGAAATTGAACCATTAGTGTTGTTCAATGTTGCTTTCTTCTTCGTTGCTGCTTTGAATCCTGGAACTGGCCAATTTGTAAAAGATGAAGACGATGATTAG 810 0.4037 MAQTMLLMSSVSSTYSVDLKKDPLLQLQCQRLRPKFSDISFNPLNSNSKSFSSRTFTTLALFKSKAKAPPKVVKPKPKVEDGVFGTSGGFGFTKQNELFVGRVAMIGFAASILGEAVTGKGILAQLNLETGIPIYEAEPLLLFFIIFTLLGAIGALGDRGKFVDDEPNTGGVIPPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVAFFFVAALNPGTGQFVKDEDDD 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02148 269 Gene3D Chlorophyll a/b binding protein domain 56 133 - -
Car05g02148 269 Pfam Chlorophyll A-B binding protein 82 214 IPR022796 -
Car05g02148 269 PANTHER PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC 1 178 - -
Car05g02148 269 PANTHER PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC 192 254 - -
Car05g02148 269 Gene3D Chlorophyll a/b binding protein domain 134 240 - -
Car05g02148 269 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 1 178 - -
Car05g02148 269 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 192 254 - -
Car05g02148 269 SUPERFAMILY Chlorophyll a-b binding protein 67 248 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02148 K03542 - gmx:100807355 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02148 05 66687552 66689459 Car05g02148 05 66687552 66689459 ECH