Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02144 ATGTCTCAAGTGATGTTATTGTGGCATGCAATTGCATTGTTCCTGTGTGTTTCCAATTTGGTCTCTGGTTCAAGCCATAATAATGCCATAAATGGACATACAAAGAGCAGAAATGAAGTGATCATTGCTCATCATGGAGCTGTTGCCACCGATGATCGTCGATGTTCCAGAATTGGGCTGAATGCTATCCTTGAAGGAGGGCATGCAGTGGATGCTGCTGTGGCTGCTGCTCTTTGTTTAGGGGTTGTAAGTCCAGCTTCAAGTGGTCTTGGTGGTGGTGCCTTTATGCTCCTTACCTTATCTAATGGAGAAGCAAAGGCATTTGATATGAGAGAAACTGCTCCTCTTCTTGCTTCCAAGGACATGTATGGTGGCAATAGTACTTTAAAGGAAACAGGTAGTCTCTCAATAGCAGTTCCAGGAGAATTTGCAGGCCTTCACAAGGCATGGAAACAACACGGAAAGCTTCCATGGAAGAGACTTGTAAAGCCAGCTTTATTTCTTGCTAGTAGAGGCTTTAAAATATCACCATACCTCCACATGCAAATGGAAACAACAGAGTCAGATATATTGAATGACATTGGTCTTCGTAGTATATTTGCACCACGTGGAAAATTGTTGAAGGTAGGTGAGGTTTGCCGTAATAAGAAACTAGCAAACACTCTTAAACAAATTTTAATGTTTGGTCCACAAGCTTTCTATGGTGGATCAATTGGCCGTAATCTAGTTAGAGATGTTCAAAAGGCTGGAGGGATATTGAGTATGAAAGACCTTAAAAGATACACTGTTAAAGAAAAGGAACCTATATCTACAGATGTTTTTGGATTAAAGATCCTTGGCATGCCTCCTCCTTCAGGTGGGCCTCCGATGATGCTGCTGCTGAACATTTTAGCACAATATGAGCTTCCTTCAGGTCTTTCTGGTGCCCTTGGGATCCATAGAGAAATTGAGGCTTTGAAACATGTTTTTGCTGTGAGAATGAATCTTGGGGATCCTGATTTTGTAAATATAACTGGAGTTCTTTCTGATATGCTTTCTACTAAGTTTGCTCAAGTGTTGAGAAAAGACATCAATGATAATAGGACTTTTAATTCCAGTCATTATGGTGGCAGGTGGAATCAAATTAATGATCATGGTACAAGTCATATAAGCATAATAGATTTAGAGAGAAATGCTGTTTCCATGACTACAACAATAAATGGATATTTTGGTGCAAAGATTCTTTCACCAAGTACAGGAATAGTACTAAACAATGAAATGGATGATTTTTCTATGCCTGTAAATGTTTCCAACAAGGATGTTCCACCACCTTCTCCTGCCAATTTCATTATGCCAGGGAAAAGACCATTATCATCCATGTCACCAACTATTGCTCTCAAGGATGGGAAAGTGAAAGCAGTGGTAGGTGCAAGTGGAGGGGCTATGATTATTGCAGGAACTTCAGAAGTTCTTTTGAATCACTTTGTCAAAGGAATGGATCCATTTTCTTCTGTAACTGCCCCAAGAGTCTATCATCGGTTGATACCTAATGTGGTTAATTATGAGAATTGGACAACTGTGAATGGTGACCACTTTGAACTTTCTGCTGATATCAGGGAAGCCCTTAGAAGTAAGGGCCATGTCCTAAAGGGCCTTGCTGGTGGGACAATTTGCCAATTTATCGTTTTAGACAATTTTGAGCATTCTAGGATAAATGAAGGTATTGGAAAGCTTGTGGCAGTGAGTGATCCAAGAAAGGGTGGTTTTCCTGCAGGCTTTTGA 1761 0.4043 MSQVMLLWHAIALFLCVSNLVSGSSHNNAINGHTKSRNEVIIAHHGAVATDDRRCSRIGLNAILEGGHAVDAAVAAALCLGVVSPASSGLGGGAFMLLTLSNGEAKAFDMRETAPLLASKDMYGGNSTLKETGSLSIAVPGEFAGLHKAWKQHGKLPWKRLVKPALFLASRGFKISPYLHMQMETTESDILNDIGLRSIFAPRGKLLKVGEVCRNKKLANTLKQILMFGPQAFYGGSIGRNLVRDVQKAGGILSMKDLKRYTVKEKEPISTDVFGLKILGMPPPSGGPPMMLLLNILAQYELPSGLSGALGIHREIEALKHVFAVRMNLGDPDFVNITGVLSDMLSTKFAQVLRKDINDNRTFNSSHYGGRWNQINDHGTSHISIIDLERNAVSMTTTINGYFGAKILSPSTGIVLNNEMDDFSMPVNVSNKDVPPPSPANFIMPGKRPLSSMSPTIALKDGKVKAVVGASGGAMIIAGTSEVLLNHFVKGMDPFSSVTAPRVYHRLIPNVVNYENWTTVNGDHFELSADIREALRSKGHVLKGLAGGTICQFIVLDNFEHSRINEGIGKLVAVSDPRKGGFPAGF 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02144 586 Pfam Gamma-glutamyltranspeptidase 63 581 - -
Car05g02144 586 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 38 586 IPR029055 -
Car05g02144 586 PRINTS Gamma-glutamyltranspeptidase signature 68 93 - -
Car05g02144 586 PRINTS Gamma-glutamyltranspeptidase signature 136 154 - -
Car05g02144 586 PRINTS Gamma-glutamyltranspeptidase signature 154 173 - -
Car05g02144 586 PRINTS Gamma-glutamyltranspeptidase signature 252 268 - -
Car05g02144 586 PRINTS Gamma-glutamyltranspeptidase signature 281 300 - -
Car05g02144 586 PRINTS Gamma-glutamyltranspeptidase signature 380 398 - -
Car05g02144 586 PRINTS Gamma-glutamyltranspeptidase signature 404 422 - -
Car05g02144 586 PRINTS Gamma-glutamyltranspeptidase signature 445 460 - -
Car05g02144 586 PRINTS Gamma-glutamyltranspeptidase signature 469 486 - -
Car05g02144 586 Gene3D - 375 586 IPR043137 -
Car05g02144 586 PANTHER GLUTATHIONE HYDROLASE 1-RELATED 8 585 - -
Car05g02144 586 PANTHER GAMMA GLUTAMYL TRANSPEPTIDASE 8 585 IPR000101 GO:0006751|GO:0036374
Car05g02144 586 Gene3D - 268 372 IPR043138 -
Car05g02144 586 TIGRFAM g_glut_trans: gamma-glutamyltransferase 48 517 IPR000101 GO:0006751|GO:0036374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02144 Car-Chr5 66645158 66648480 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02144 31 586 Miscellaneous Gene Families AT4G39640 65.771 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02144 K18592 - gmx:100797040 900.582