Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02136 ATGTCATCACCATACCCAATACTGGACGATAAGCCTATTAATCAGTGGAAGGTTACAGCTCTGAAAGAGGAGTTGAAGCGAAGGAAGTTAGCTACCAAAGGTTTAAAGGAAGATTTAATCAATCGCTTAGATGAAGCCCTTCGCCTGGAAAGGGAGGCTGCCGAGGCTTCCCCCGAACAAGAGACTGTTGAGCCTTCCTCTGAAAAGGAGGCTGCTGCTGAGGGATTGGAGAAGGATGAGGCTAATGGTTTAGGCACTCAAGTAGATGGGATAAAAGATTCCCAGACTGATAAAGTGGATGCTGAAGTGGCTGATACAATTGAAAGGGAGAGCCTCCAAACATTTGAAGCTTTTGAACAGGGGAATAGTGTTGCAGTGGAACCAATTGAATTGGAAAATGTAGTGAAGGTTCCAGATGTTGTGGATAATGTTGGTGATAAGAATGACAAGCAGGAGGGCGGTGTTACCGTCCCAGTTGAAGTTAATAAGAGTGTGTCAGCAATGGATCAAGAAGGTGAACATGCGGGTTTGCCCGTTGGTGTAGAAGCTTGTAGCACAGTTGAGGAGGTGATTACCCATGCTTCTACTGTGGAGACCACTGTTACAGTCACCGAGACTATTCTAAGCGAGACTGTATCAACAGAAGTAGTAGTTAGTGGTCAGGATTCTTATAGTGCAGAGAAGAATAATGAAGATTCAGCAATCAAGCTAGAGAATGAGGAGTCAAGGGTGCAGCTGGATAGTGAGGACTCAAAGCCTCCACTGGAGTTTGACACAAAGCCCCCAGGTGACGATTTCATGCCCAAATCTTCTGCTCCAGAAAACCAGGTATCTGAGGTCTACCCTAGTTTAGGGTTTCAAGTAAAATCTGATTCTATTTCTACTGATTCTGTGTCAATTAATCAAAAGAATGAACTAAAGGATACTATAATTGCTAATAATGTCAAATTAGAACAAGATAATGTTAGGCCAGAGATGGTGGAAGAACCATCATCCAGAAATGATGTACCTGTTTATGATGAATCACCTGCAATGGATGTTGGAGGGCTGCATGAAAAAAAGTCACCTGTTGAAGAAAATAACAACAATGTTCCAAGTCCAGACTTGAACAAAACCAATAGTGGTGATGATGTGGGGTATCCAGAAAAGTTGAACTTGGACAGAAGTTCTGGTGATGATTCCATGGAAGAGGATTTGCCTGAGACTAGGCAATATGATTCTAAGTTTAATAATGTTGATGAATTTAGAGACAAAGTTGAGAATAATGAAGTGCCTATGGTGAAGGAGGAAAGCAGAACCATAGTCGTGGGAGATGGTGTATCTGCAAGGAAAAGCGATACCCATCAAGATATTGACATGAGTCCCACTTCTTTGACTGAGAAGCGAAAATATCCTGAACAAACATTAGTTGTCAACAATGAGCCTGCAAAAAGGCAACGCAGGTGGAACACTGAAACAGTTAAAGGATCAGATCTGCAAAGCACTACTCCCAAACCTGCCACTACACCCAAGGATGGACAGGTTACTCTGAAGCGCAACTTCTCTAGGTCTGATTCCTCTGCAACTGAGGATACACCTAAAGAGCGCATTGTTCCACCATCACGAAGGACCCCAACTAATTCTCTCAGGATTGATCAATTCCTTCGTCCATTTACCCTAAAAGCAGTGCAAGAACTTCTTGGCAAAACTGGGTGTGTTAGCAGTTTCTGGATGGACCAAATTAAGACCCACTGCTATGTTACTTACTCGTCCATCGAAGAGGCCACTGAGACACGAAATGCTGTGTATAATTTGCAATGGCCTCCAAATGGTGGGAGACTCTTAGTTGCCGAGTATGTTGATCCTGAAGAAGTGAAAATGAAGTTAGAAGCTCCTTCTACTCCGACCGCCCCCTTTGTCAGTGCTCCAACAGTAACAGTTCTTCCTGCGCCACCTTCACAGCCAGAGCCTTCCCCGCGTCAGCTCAGGGAGCATCATCTTCCAGCTACTCTCCCACCTCCACCACCATTGTCAAGGCCCCCACCAGTTGCCAGGGAGCGTCTTCCATCCCCACCACCCCTTCCTGAGAAAGTGGACCCACCTATCGTCACTCTGGATGATCTCTTCCGCAAAACAACATCAACTCCTCGGATCTATTATTTACCTTTGTCTGAAGAGCAGGTTGCTGGAAAACTTGCGGCACAGGGTAAAAGCGTGAGGCAGTAG 2205 0.4485 MSSPYPILDDKPINQWKVTALKEELKRRKLATKGLKEDLINRLDEALRLEREAAEASPEQETVEPSSEKEAAAEGLEKDEANGLGTQVDGIKDSQTDKVDAEVADTIERESLQTFEAFEQGNSVAVEPIELENVVKVPDVVDNVGDKNDKQEGGVTVPVEVNKSVSAMDQEGEHAGLPVGVEACSTVEEVITHASTVETTVTVTETILSETVSTEVVVSGQDSYSAEKNNEDSAIKLENEESRVQLDSEDSKPPLEFDTKPPGDDFMPKSSAPENQVSEVYPSLGFQVKSDSISTDSVSINQKNELKDTIIANNVKLEQDNVRPEMVEEPSSRNDVPVYDESPAMDVGGLHEKKSPVEENNNNVPSPDLNKTNSGDDVGYPEKLNLDRSSGDDSMEEDLPETRQYDSKFNNVDEFRDKVENNEVPMVKEESRTIVVGDGVSARKSDTHQDIDMSPTSLTEKRKYPEQTLVVNNEPAKRQRRWNTETVKGSDLQSTTPKPATTPKDGQVTLKRNFSRSDSSATEDTPKERIVPPSRRTPTNSLRIDQFLRPFTLKAVQELLGKTGCVSSFWMDQIKTHCYVTYSSIEEATETRNAVYNLQWPPNGGRLLVAEYVDPEEVKMKLEAPSTPTAPFVSAPTVTVLPAPPSQPEPSPRQLREHHLPATLPPPPPLSRPPPVARERLPSPPPLPEKVDPPIVTLDDLFRKTTSTPRIYYLPLSEEQVAGKLAAQGKSVRQ 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02136 734 MobiDBLite consensus disorder prediction 238 277 - -
Car05g02136 734 Pfam RNSP1-SAP18 binding (RSB) motif 689 731 IPR032552 -
Car05g02136 734 CDD RRM_ACINU 539 623 IPR034257 -
Car05g02136 734 Gene3D SAP domain 3 61 IPR036361 -
Car05g02136 734 ProSiteProfiles SAP motif profile. 13 47 IPR003034 -
Car05g02136 734 MobiDBLite consensus disorder prediction 50 77 - -
Car05g02136 734 MobiDBLite consensus disorder prediction 321 405 - -
Car05g02136 734 MobiDBLite consensus disorder prediction 359 373 - -
Car05g02136 734 Coils Coil 36 56 - -
Car05g02136 734 MobiDBLite consensus disorder prediction 441 538 - -
Car05g02136 734 SMART sap_9 13 47 IPR003034 -
Car05g02136 734 MobiDBLite consensus disorder prediction 517 531 - -
Car05g02136 734 MobiDBLite consensus disorder prediction 381 405 - -
Car05g02136 734 MobiDBLite consensus disorder prediction 238 263 - -
Car05g02136 734 MobiDBLite consensus disorder prediction 661 692 - -
Car05g02136 734 PANTHER SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN 1 731 - -
Car05g02136 734 Pfam SAP domain 13 47 IPR003034 -
Car05g02136 734 MobiDBLite consensus disorder prediction 443 459 - -
Car05g02136 734 MobiDBLite consensus disorder prediction 486 516 - -
Car05g02136 734 PANTHER SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN 1 731 - -
Car05g02136 734 SUPERFAMILY RNA-binding domain, RBD 533 621 IPR035979 GO:0003676
Car05g02136 734 SUPERFAMILY SAP domain 13 50 IPR036361 -
Car05g02136 734 MobiDBLite consensus disorder prediction 50 101 - -
Car05g02136 734 MobiDBLite consensus disorder prediction 626 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02136 Car-Chr5 66588064 66590932 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02136 K12875 - gmx:100786288 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02136 05 66588064 66590932 Car05g02136 05 66588064 66590932 ECH