Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02134 ATGCTGGGAGTGATCTCCTTTGGGTTCCATGTGATTGCATACAGTGTGCTCCCTTGTCTGCACGTTACTATCCCATATTGGTGCTCCTTCACATATGGGGCATCTATTATGCAGGATAGAGATCTGAATGAGTATAGTCCTGCTCGATCGTTATCCAGCAAGCATTTATCTTGCAGCCATCGGTTATGTGATATGGGTTCAAACTGTAAAACTTCCAAGCAGCAGTGTCCGTACACTATCAATTACTTAACAGATAATACTTCAAGTTCTGGATTGTTAGTTGAGGACATATTGCATCTTCAATCTAGCGATGGTGGCGGTGGTGGCAGCACATCTAACTCCTCTGTTCAGGCTCCAGTTGTTGTCGGGTGTGGCATGAAGCAAAGTGGTAGTTATTTGGAAGGTGTTGCTCCAGATGGTGTCATTGGTTTGGGACCTGGAGAGAGTTCAGTTCCGAGTTTTCTTGCTAAATCAGGATTAATCCGTGATTCTTTTTCGTTGTGCTTTAATGAAGACTCTTCTGGTAGATTATTTTTTGGTGACCAGGGATCAACCGTTCAACAGTCTACTCCATTCTTGCCCTTGGATGGAATGTTCTCAACCTACATTATTGGAGTGGAGGCATTTTGTATCGGGAATTATTGTCCTAAAGTAACTAGTTTTAAAGCTCAGTTTGATAGTGGAACATCATTTACGCTTCTTCCCGGTCATGCATACAGAGCAATAACTGAGGAGTTTGACAAACAAGTAAATGTTACAAGATCTACCTTAAATGATTCTCTTTGGGAGTATTGTTATGCACTCAGTTTGCAACAGCTGCCTAAGATTCCCACATTGACACTCACGTTCCAACAGAATAACAGTTTTGTGGTCTATAATCCCATAGTTGTATTCTACAATAATCAGGAAATTGATGGATTTTGTTTAGCAATACAGCCAACTGAAGGGGATATCGGAACAATTGGACAAAACTTCATGATGGGATACCGGTTGGTATTTGATAGGGAAAACAAGAAGCTAGCATGGTCACACTCAAATTGTCAGGATCTGGGTCTAGGTAAGAGGATACCCTTCTCCCCTGCAAATGGGACATCATCAAACCCGCTGCCTGCAGACGAGCAGCAAAGATCCAATGGACATGCAGTTTCTCCCGCTGTTGCCGGAAGGACTCCTCAAAAACCTTCAGTTGCTTCATCTCAGATGATTTCATACCGGAAACATTTGCACTGCTATTGTTTGCTTCTATTTCAACTTCTGTCAATCTTTTACTAA 1272 0.4214 MLGVISFGFHVIAYSVLPCLHVTIPYWCSFTYGASIMQDRDLNEYSPARSLSSKHLSCSHRLCDMGSNCKTSKQQCPYTINYLTDNTSSSGLLVEDILHLQSSDGGGGGSTSNSSVQAPVVVGCGMKQSGSYLEGVAPDGVIGLGPGESSVPSFLAKSGLIRDSFSLCFNEDSSGRLFFGDQGSTVQQSTPFLPLDGMFSTYIIGVEAFCIGNYCPKVTSFKAQFDSGTSFTLLPGHAYRAITEEFDKQVNVTRSTLNDSLWEYCYALSLQQLPKIPTLTLTFQQNNSFVVYNPIVVFYNNQEIDGFCLAIQPTEGDIGTIGQNFMMGYRLVFDRENKKLAWSHSNCQDLGLGKRIPFSPANGTSSNPLPADEQQRSNGHAVSPAVAGRTPQKPSVASSQMISYRKHLHCYCLLLFQLLSIFY 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02134 423 Pfam Xylanase inhibitor C-terminal 223 343 IPR032799 -
Car05g02134 423 Gene3D Acid Proteases 182 349 IPR021109 -
Car05g02134 423 Pfam Xylanase inhibitor N-terminal 43 181 IPR032861 -
Car05g02134 423 MobiDBLite consensus disorder prediction 363 394 - -
Car05g02134 423 SUPERFAMILY Acid proteases 40 348 IPR021109 -
Car05g02134 423 PANTHER ASPARTYL PROTEASES 18 364 IPR001461 GO:0004190|GO:0006508
Car05g02134 423 Gene3D Acid Proteases 18 181 IPR021109 -
Car05g02134 423 ProSiteProfiles Peptidase family A1 domain profile. 32 343 IPR033121 -
Car05g02134 423 PANTHER ASPARTIC PROTEINASE-LIKE PROTEIN 1 18 364 - -
Car05g02134 423 MobiDBLite consensus disorder prediction 363 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02134 Car-Chr5 66550197 66554584 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02134 44 350 Miscellaneous Gene Families AT1G44130 26.364 2.41e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02134 - - mtr:MTR_3g087780 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02134 05 66550197 66554584 Car05g02134 05 66550197 66554584 ECH