Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02133 ATGGGAGTTGGAGGCACTCTTGAGTACTTGTCTGATCTAATGGGAAGTGGCCATCATCACCAACACAAGATCAAGAGGAAGAAGCAATTACAAACCGTAGAGTTGAAGGTGAGAATGGATTGTGATGGTTGTGAACTTAAAGTCAAGAAAGCCCTCTCTTCACTAAATGGAGTAAAATCAGTGGAGATAAACAGGAAACAACAAAAAGTGACAGTAATGGGGTATGTGGAAGCAAATAAGGTACTAAAGAAAGCAAAATCAACAGGGAAGAAAGCAGAGATTTGGCCTTATGTGCCATACAACATGGTGACTCATCCATATGCTGTTCCTGCTTATGACAAGAAGGCTCCTCCTGGATATGTGAGGAGATTGGAGACAACAGGAACTGTTATAACATATGAAGATTCACACATCACCACTTTGTTCAGTGATGAAAACCCAAATGCATGCTCCATTATGTAG 462 0.4091 MGVGGTLEYLSDLMGSGHHHQHKIKRKKQLQTVELKVRMDCDGCELKVKKALSSLNGVKSVEINRKQQKVTVMGYVEANKVLKKAKSTGKKAEIWPYVPYNMVTHPYAVPAYDKKAPPGYVRRLETTGTVITYEDSHITTLFSDENPNACSIM 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02133 153 ProSiteProfiles Heavy-metal-associated domain profile. 39 94 IPR006121 GO:0046872
Car05g02133 153 Pfam Heavy-metal-associated domain 36 91 IPR006121 GO:0046872
Car05g02133 153 CDD HMA 34 93 IPR006121 GO:0046872
Car05g02133 153 Gene3D - 18 96 - -
Car05g02133 153 SUPERFAMILY HMA, heavy metal-associated domain 30 96 IPR036163 GO:0046872
Car05g02133 153 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 20 4 153 - -
Car05g02133 153 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 4 153 IPR045181 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02133 Car-Chr5 66538995 66540288 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02133 - - gmx:100500473 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02133 05 66538995 66540288 Car05g02133 05 66538995 66540288 ECH
Car06g00773 06 7674020 7675414 Car05g02133 05 66538995 66540288 PCT