Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02132 ATGGAATCGGATTCTCCAAGATCCGAATCCCAATCGGACCCTCTCCGAAACACACTGGACGAACTTTGCCACGAACTTAACTCCCTCCAAGACCTAGCCAACCGCGGCGCGTGGCGTTCCATCATCGACAAAGTTGCACGCGCCAGAGCCCTCTCTCTTCTCCAAAAacctcacgatcacctcacctacctcacctTCAACACCCTCGCATTCACAAAACTACGTCGTTTCAACGAAGCTTCCGCTGAACTCGATTCCGTCGAAGATCTCGATAGTTCTCACTACAGATACGAAACCTACCCCAAAATTTACCCTAATCGTGTCGGATCAATGGTTCCTTTTTCTCTCCGATGGCTCCATGCGTTAATTCCAATCAAGTTAGGTCAACGCCAACAAGGAATCGATCGATTATACTCTCTTCTCGATTTTGTGCGTGAGAAGATTAAGGACAAGGAAAACGGTAATTTCGCCGTTTCGCTTCGTGTGTGGAGAAAAAGAGAGGTTTTTGTTGTGAACTGTATAATTGGTCATCATTTGAGTCACAAAGAGTTTGGTGTGTGTTTGAGTTTGATGAAAAACTTACTTTCTCGTGATTCTTTTGATCCTTTTTTGATTTCGCAACTTGGGTACATTCAATTGCAAACTGGCGACTTGGAAGGTGCGAAAGCTTCGTTTTTGAAAGCTGAAGTGGAAGGGAAGAGCAATGGGTCATTGAGTGAGGTTGAGTTTAAGAATTTAGTTAACCGAAACAAGGCTTTGGTATATATGGTTGGGAAGGATTATGTATCTGCTGTGAGGGAATATGACGAGTGCATTGAGAGGGATCATAGTGATATAGTGGCTTTTAATAATAAGGCTCTTTGTTTGATGTATTTGAGGGATTTGTCTGATTCTATCAAGGTGTTGGAAAATGCTCTTGAAAGGGTTCCTACTGTTGCTCTTAATGAGACTCTTGTTGTTAATTTGTGTAGTATGTATGAGTTGGCTTATGTTAATCACTCTGATATTAAGAGAACACTTAGTAGTTGGATTGCTCGTGTTGCTCCTGATGACTTTGATGCAACATGTACTCGTACATGA 1080 0.4111 MESDSPRSESQSDPLRNTLDELCHELNSLQDLANRGAWRSIIDKVARARALSLLQKPHDHLTYLTFNTLAFTKLRRFNEASAELDSVEDLDSSHYRYETYPKIYPNRVGSMVPFSLRWLHALIPIKLGQRQQGIDRLYSLLDFVREKIKDKENGNFAVSLRVWRKREVFVVNCIIGHHLSHKEFGVCLSLMKNLLSRDSFDPFLISQLGYIQLQTGDLEGAKASFLKAEVEGKSNGSLSEVEFKNLVNRNKALVYMVGKDYVSAVREYDECIERDHSDIVAFNNKALCLMYLRDLSDSIKVLENALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFDATCTRT 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02132 359 Pfam Tetratricopeptide repeat 207 228 IPR019734 GO:0005515
Car05g02132 359 PANTHER F-BOX DOMAIN, TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN PROTEIN-RELATED 9 358 - -
Car05g02132 359 SUPERFAMILY TPR-like 193 313 IPR011990 GO:0005515
Car05g02132 359 Gene3D Tetratricopeptide repeat domain 172 340 IPR011990 GO:0005515
Car05g02132 359 PANTHER D-ALANYL-D-ALANINE CARBOXYPEPTIDASE 9 358 - -
Car05g02132 359 SMART tpr_5 202 235 IPR019734 GO:0005515
Car05g02132 359 SMART tpr_5 279 312 IPR019734 GO:0005515
Car05g02132 359 SMART tpr_5 245 278 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02132 K20309 - gmx:100779691 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02132 05 66533855 66536462 Car05g02132 05 66533855 66536462 ECH