Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02128 ATGTTTATCGAGAATTTTAAGGTTGATAGTCCTAATGTTAAGTACACCGAAACTGAGATTCAATCTGTTTACAATTATGAAACTACGGAACTTGTTCATGAAAACAGAAATGGCACTTATCAGTGGATTGTTAAACCTAAAACCGTTAAATATGAATTTAAAACCGATACTCATGTCCCTAAATTGGGGGTAATGCTTGTTGGGTGGGGTGGAAACAACGGCTCAACCTTGACCGGTGGTGTTATTGCTAACAGAGAGGGTATTTCATGGGCAACGAAAGATAATATTCAACAAGCTAATTACTTTGGTTCCCTAACTCAAGCTTCAGCTATCCGAGTTGGATCTTTCCAAGGAGAGGAAATCTATGCTCCCTTTAAGAGCTTGCTTCCAATGGTCAACCCTGATGACATTGTTTTTGGGGGATGGGATATCAGTGACATGAACCTTGCTGATGCTATGGCAAGAGCCAGGGTTTTTGACATTGATTTGCAAAAGCAGTTGAGACCTTATATGGAATCTATGGTTCCACTCCCTGGTATCTATGACCCGGATTTCATTGCTGCTAATCAAGGAGACCGTGCAAATAATGTTATCAAGGGTACTAAGAGAGAACAAATTAACCAAATCATCAAAGACATTAAGGAATTTAAGGAAGCTAACAAAGTGGACAGGGTTGTTGTCCTTTGGACAGCTAACACAGAGAGGTACAGTAATTTAGTTGTGGGACTCAATGACACCATGGAGAACCTTTTTGCTGCTGTCGACAGAAATGAGTCTGAGATTTCACCTTCCACTTTGTTTGCCATTGCTTGTGTTATGGAAAATGTTCCTTTCATCAACGGAAGCCCTCAAAACACTTTTGTCCCAGGGCTGATTGATCTTGCCATCAAGAGGAACACTTTAATTGGTGGAGATGACTTCAAGAGTGGTCAAACCAAAATGAAATCTGTGTTGGTGGATTTCCTTGTGGGAGCTGGTATCAAGCCAACATCAATAGTGAGTTACAACCATCTTGGAAACAATGATGGTATGAACCTCTCAGCACCACAAACCTTTCGATCCAAGGAAATCTCCAAGAGCAACGTTGTCGACGATATGGTCAACAGCAATGGCATCCTCTATGCACCTGGCGAACATCCAGACCATGTTGTAGTCATCAAGTATGTGCCTTATGTTGGAGATAGCAAGAGAGCCATGGATGAGTACACTTCAGAAATATTCATGGGTGGAAAGAGCACTATTGTGTTGCACAACACATGTGAGGATTCCCTCTTGGCTGCTCCTATTATCTTGGACTTGGTTCTTCTTGCTGAGCTCAGCACTAGAATTCAGTTTAAATCTGAAGCAGAGAACAAGTTTCACACATTCCACCCTGTTGCTACCATCCTCAGTTATCTCACCAAGGCTCCTCTGGTGAGTTCAATCTATCTGTTTCATGTTGAACACATACCCACATGTTTATTTTTTCTTTTCATATAG 1479 0.4131 MFIENFKVDSPNVKYTETEIQSVYNYETTELVHENRNGTYQWIVKPKTVKYEFKTDTHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDNIQQANYFGSLTQASAIRVGSFQGEEIYAPFKSLLPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGDRANNVIKGTKREQINQIIKDIKEFKEANKVDRVVVLWTANTERYSNLVVGLNDTMENLFAAVDRNESEISPSTLFAIACVMENVPFINGSPQNTFVPGLIDLAIKRNTLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVNSNGILYAPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKSTIVLHNTCEDSLLAAPIILDLVLLAELSTRIQFKSEAENKFHTFHPVATILSYLTKAPLVSSIYLFHVEHIPTCLFFLFI 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02128 492 Pfam Myo-inositol-1-phosphate synthase 310 423 IPR013021 -
Car05g02128 492 PIRSF Myoinositol-ppht_synth 50 481 IPR002587 GO:0004512|GO:0006021|GO:0008654
Car05g02128 492 Gene3D - 1 356 - -
Car05g02128 492 Gene3D - 369 479 - -
Car05g02128 492 PANTHER MYO-INOSITOL-1 PHOSPHATE SYNTHASE 1 473 IPR002587 GO:0004512|GO:0006021|GO:0008654
Car05g02128 492 PANTHER INOSITOL-3-PHOSPHATE SYNTHASE 1 473 - -
Car05g02128 492 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 475 IPR036291 -
Car05g02128 492 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 309 422 - -
Car05g02128 492 Pfam Myo-inositol-1-phosphate synthase 62 474 IPR002587 GO:0004512|GO:0006021|GO:0008654
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02128 Car-Chr5 66493550 66496696 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02128 K01858 - gmx:100800820 902.894
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02128 05 66493550 66496696 Car05g02128 05 66493550 66496696 ECH
Car06g00780 06 7722625 7727175 Car05g02128 05 66493550 66496696 PCT