Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car05g02124 | ATGGAAAACCCAAAGAGTCTCTTCGCTATCCTCTTTCTTTTCTCCTTTTGCTTCGCCGGAACCGTAAAATCTGACGATGATTGTGTGTTCACGGTGTACGTTAGGACCGGGTCGATCATCAAGGGAGGAACGGACTCTATCATCGGACTCAAGCTATACGATGCATCCGGTTACGGCATATACATAAAGGATCTTGAAGCATGGGGCGGGTTAATGGGTCCGGATTATAACTACTACGAACGGGGCAACCTTGACATATTCAGTGGCAAGGGTCCTTGTTTGGACGGACCCGTTTGTGCGGTGAACTTGACTTCAGACGGGTCGGGTCCTCATCACGGGTGGTATTGTAATTACGTGGAGGTTACTTCAACTGGGGTCCACATTCCATGCGCTCAGCAACAGTTCACTATTGAACAGTGGCTGGCTACCGACACATCGCCTTATGAGCTTTCGGCCGTTAGGAACTATTGTTCAAATGATTTGACTCAGGCCCGTTTAAAGACCGTTGATGCCACCAGATCTGGGCCTGATTTCTCTATTTTGGGCTCAGCCGTCCGCGCTTAG | 564 | 0.4947 | MENPKSLFAILFLFSFCFAGTVKSDDDCVFTVYVRTGSIIKGGTDSIIGLKLYDASGYGIYIKDLEAWGGLMGPDYNYYERGNLDIFSGKGPCLDGPVCAVNLTSDGSGPHHGWYCNYVEVTSTGVHIPCAQQQFTIEQWLATDTSPYELSAVRNYCSNDLTQARLKTVDATRSGPDFSILGSAVRA | 187 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car05g02124 | 187 | Pfam | PLAT/LH2 domain | 31 | 149 | IPR001024 | GO:0005515 | |
| Car05g02124 | 187 | SUPERFAMILY | Lipase/lipooxygenase domain (PLAT/LH2 domain) | 29 | 146 | IPR036392 | GO:0005515 | |
| Car05g02124 | 187 | PANTHER | - | 1 | 186 | - | - | |
| Car05g02124 | 187 | Gene3D | PLAT/LH2 domain | 19 | 147 | - | - | |
| Car05g02124 | 187 | CDD | PLAT_plant_stress | 28 | 155 | - | - | |
| Car05g02124 | 187 | ProSiteProfiles | PLAT domain profile. | 28 | 155 | IPR001024 | GO:0005515 | |
| Car05g02124 | 187 | PANTHER | PLAT-PLANT-STRESS PROTEIN | 1 | 186 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Car05g02124 | Car-Chr5 | 66443111 | 66444211 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car05g02124 | - | - | adu:107469134 | 295.819 |