Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car05g02119 | ATGGATACATCACAAATACCTTCTCATGCTTACTTCAGCTGTGAAGTGAGAATAATTCAAGCCAGAAACATTGAATTCATCAAATCTACGAAAAACTTGTTTGCAAGGTTGTATCTTCCTACAGGAAACAACAAAAGAATTCAACTCAACACCAAAAATGTTTCAACCAAATCAGCACCCTTTTGGAACGAGTCCTTTGATTGTTCGTGTCCCCATGAATTCTTAGAAAACCTTAAACAACAAAGCTTAGTGTTGGAGCTGAGGCAAAGGAAGATGTTGGGGTCACATCTTGTTGGAAAAGGTGAGATTCCATGGAAGGCGATTCTTGAATCACAAAACATGGAGTTGAAAAAATGGTTGAAGATGGATTTGGTGAGTGGAAGTGATTGCAAAGAGGGTATGTTGAAAGCACCTGAAGTTGAAGTGGAAATTAAGATAAGAGTGGCTTCGATTATTGAGATGGAGAAGCAGAATAGAAATATGTTGAATAATTGGAATGAGTGTGGATGCAAAAATGGACATGATCACAATATTTGGTGTTGCGCTGAAGATTGTCATATATTTGCATTTGGTGCAGCTTTGGAGGCTTTTTGA | 594 | 0.3788 | MDTSQIPSHAYFSCEVRIIQARNIEFIKSTKNLFARLYLPTGNNKRIQLNTKNVSTKSAPFWNESFDCSCPHEFLENLKQQSLVLELRQRKMLGSHLVGKGEIPWKAILESQNMELKKWLKMDLVSGSDCKEGMLKAPEVEVEIKIRVASIIEMEKQNRNMLNNWNECGCKNGHDHNIWCCAEDCHIFAFGAALEAF | 197 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car05g02119 | 197 | ProSiteProfiles | C2 domain profile. | 1 | 120 | IPR000008 | - | |
| Car05g02119 | 197 | PANTHER | OSJNBA0006M15.15 PROTEIN | 1 | 197 | - | - | |
| Car05g02119 | 197 | SMART | C2_3c | 13 | 117 | IPR000008 | - | |
| Car05g02119 | 197 | Pfam | C2 domain | 14 | 115 | IPR000008 | - | |
| Car05g02119 | 197 | PANTHER | OSJNBA0006M15.15 PROTEIN | 1 | 197 | - | - | |
| Car05g02119 | 197 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 11 | 129 | IPR035892 | - | |
| Car05g02119 | 197 | Gene3D | C2 domain | 3 | 150 | IPR035892 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Car05g02119 | Car-Chr5 | 66361096 | 66362179 | Dispersed/Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car05g02119 | - | - | gmx:100807677 | 263.848 |