Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02099 ATGACATCTTCGGTGATTGAAGGTGGACACGATGAGGGTAAACACGAGTCTTCGGATTTGATCATTAATCCAACGGCTGTAAACCTTTCAGTTCCTAGTGAAACATTTTTGAAAGCCGCGATTTCTCTCAAGGATGAGGTGGTGGAGGTGAGTTGGAATCGGCGAGAAGTGGTTGATCCAACGGTTTATACGGGTCTTCTTGGCACGGCTTTTACTTGCCTGAGATCGTATGAGGTGACCGGTTGCCATAAGGACTTGCTGTTATGTTCGGAGATTGTTGACACATGTGCCACTCTTGCACGTGCCTCCCTCAGACACGTGACATTTTTGTGTGGTAGAGGAGGCGTATATGCACTTGGAGCTGTTGTTGCTAATTACATGGGGGACCTCAATAAGCGTGACTTGTTTTTGGGTCTATTCGTTGAGGTTGCAAAAGAGAGAGCCTTGCCTATTGGACCCGAGGAAGGCGGTTTCGGAATGTCATACGATCTTCTATACGGACGAGCTGGATTCTTATGGGCCGCATTGTTTGTAAACAAACACCTAGGAGAAGACACAGTGCCCAAAGATATTCTAATGTCTATTATTGATGCAGTATTGGCTGGTGGTAGAGCAGGAGCTTCTGATATTAAAGACTGTCCATTGATGTATAGATGGCATGGGACTAGGTACTTAGGTGCAGCAAATGGTGTTGCTGGTATTCTTCATGTGCTCCTTCATTTTCCACTTCCAAGTGAGGATGCTGAAGATGTTAAGGGAACTTTGAGATATTTGATAAGTAAACGTTTCCCTCACAGTGGAAATTACCCTTCAAGTGAAGGGAATCCAAGAGATAAGTTGGTGCAGTGGGGTCATGGTGCAACTGGAATGGCCATTACATTGTCTAAAGCAGCACAGGTTTTTCCAAGTGACAGAGAACTACGAGATGCAGCAATAGAAGCAGGGGAAGTTGTGTGGAAAAATGGATTGGTGAAGAAGGTAGGACTTGCTGATGGTGTATCCGGAAACGCCTACGCCTTCCTTTCCCTCTACAAACTAACCAAAGACGCTATATATGTGGAGAGGGCAAAATCATTCTCTTGCTTCTTGTATGATAATGCTAGAGTTCTTGCAGCTGAAGGGCAAGATGTTATGGGTGCCAATGGTTACTCTCTCTTCCATGGACTTGCTGGGACAGCATGCCTCTGGTTTGATTTGCTTGCACCTGCTAATTCTAGGTTTCCAGGGTATGAATTATAG 1239 0.452 MTSSVIEGGHDEGKHESSDLIINPTAVNLSVPSETFLKAAISLKDEVVEVSWNRREVVDPTVYTGLLGTAFTCLRSYEVTGCHKDLLLCSEIVDTCATLARASLRHVTFLCGRGGVYALGAVVANYMGDLNKRDLFLGLFVEVAKERALPIGPEEGGFGMSYDLLYGRAGFLWAALFVNKHLGEDTVPKDILMSIIDAVLAGGRAGASDIKDCPLMYRWHGTRYLGAANGVAGILHVLLHFPLPSEDAEDVKGTLRYLISKRFPHSGNYPSSEGNPRDKLVQWGHGATGMAITLSKAAQVFPSDRELRDAAIEAGEVVWKNGLVKKVGLADGVSGNAYAFLSLYKLTKDAIYVERAKSFSCFLYDNARVLAAEGQDVMGANGYSLFHGLAGTACLWFDLLAPANSRFPGYEL 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02099 412 Gene3D - 17 412 IPR012341 GO:0005975
Car05g02099 412 PANTHER LANC-LIKE PROTEIN 18 412 - -
Car05g02099 412 PRINTS Eukaryotic LanC-like protein family signature 192 207 IPR020464 -
Car05g02099 412 PRINTS Eukaryotic LanC-like protein family signature 260 275 IPR020464 -
Car05g02099 412 PRINTS Eukaryotic LanC-like protein family signature 298 319 IPR020464 -
Car05g02099 412 PRINTS Eukaryotic LanC-like protein family signature 398 412 IPR020464 -
Car05g02099 412 PRINTS LanC-like protein superfamily signature 59 77 IPR007822 -
Car05g02099 412 PRINTS LanC-like protein superfamily signature 162 177 IPR007822 -
Car05g02099 412 PRINTS LanC-like protein superfamily signature 224 240 IPR007822 -
Car05g02099 412 PRINTS LanC-like protein superfamily signature 280 300 IPR007822 -
Car05g02099 412 PRINTS LanC-like protein superfamily signature 327 340 IPR007822 -
Car05g02099 412 PRINTS LanC-like protein superfamily signature 382 399 IPR007822 -
Car05g02099 412 SUPERFAMILY LanC-like 40 412 - -
Car05g02099 412 CDD euk_LANCL 62 408 - -
Car05g02099 412 Pfam Lanthionine synthetase C-like protein 57 412 IPR007822 -
Car05g02099 412 PANTHER LANC-LIKE PROTEIN GCL1 18 412 - -
Car05g02099 412 SMART LANC_like_2 56 412 IPR007822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02099 Car-Chr5 66213789 66217312 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02099 - - gmx:100785406 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02099 05 66213789 66217312 Car05g02099 05 66213789 66217312 ECH