Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02092 ATGCTTGATGGGACAGAGGTGCAGTTTAAGTCGGTGACATTGCAGAAGTATGTATCTGCAGAGAATGGTGGAGGAATGAATGTGACAGTTGACAGGGATGTTTCATCTTCATGGGAAACATTCAGGTTGTGGAGAGTATCTAAATCAGAATTTCAATTCCGTACCACCCAAGGCCAATTTCTTACATGCGGTGTTGGAGGCGGCACCGTCTCTGCAACAGCAAAATTGCCTTCAACATCAGAGACTTTTGAAGTTGAGCGTAATGAAAAAAACAGGATTCACATCAAGATAAAGAATGGTCCCTATCTGCAGGCTACAACTAGTAATCAGCTCACAGCAGACTATCCAGGCGCACCAGGATGGGATGATAATGCAGCCACATTTGAAATGAAAATTGTATCAAATAACATACATGGAGATTACCAGCTAGCAAATGGTTATGACCATGATAGTGCAGAAGATGTTCTTAGGAGACATAGAAATAGCTTTATTACAGTTGAAGATTTCAAATTTCTATATAAACATGGAATAAATACAGTAAGGATACCGGTTGGGTGGTGGATTGCTTTTGATCCTGATCCTCCAAGTCCATTTATTGGAGGAAGTCTTGAAGCTCTAGATAATGCATTTTCATGGGCACAAGAATATGATATAAAATGCATAATTGACCTTCATGCTGCTCCTGGTTCACAAAATGGAATGGAACATAGTGCAAGTAGAGATGGATTCACAGGCTGGCCAACTTCTCCAGATTACATTTCAGAGTCCCTACATGTTATAGAATTTTTAATTTCTAGATATGCAAAGCATCAAGCCTTGTTGGGAATTGAGCTTTTGAACGAACCATCTGCTGGCACAGTTCCCTTAGATATTTTAATTTCCTACTACAAGAGGGGCTACCAAATTGTTCGGAAATACTCATCGTCGGCTTATGTGATATTGTGCCAAAGGATTGGCCTTGCAGATCCCTTGGAGCTTTATCAAGCCAACATAGGATCTACCAACTTAGTTTTGGATTTGCATTTCTACAACCTCTTTGACACATTCTTTGTTAATATGAGTGCCGGGGATAATGTTCAATACATATATAAAAGCCGGGAAGGTCTGTTGCAGGCGTTCAACGATTCAAATGGCCCTCTAATTTTTATTGGAGAGTGGGTGAATGAGTGGAATGTGGCAAGCGGATCCCAAACAGATTATCAGGACTTTGGAAAGGCACAGTTAGAAGTCTACAACGCAGCTTCCTTTGGCTGGTGTTATTGGACTTTAAAAAATGACAGGGAGCACTGGGATTTTGAATGGAACATTAGGAACAACTATCTTCAATTAGGTAACTCACCCAGTAAACAGAACATATACACTTTGGGATTGTTTGCATTGGTTTACACTTGGTTTTGTCTTCTTCACTTTTTGTGA 1416 0.4018 MLDGTEVQFKSVTLQKYVSAENGGGMNVTVDRDVSSSWETFRLWRVSKSEFQFRTTQGQFLTCGVGGGTVSATAKLPSTSETFEVERNEKNRIHIKIKNGPYLQATTSNQLTADYPGAPGWDDNAATFEMKIVSNNIHGDYQLANGYDHDSAEDVLRRHRNSFITVEDFKFLYKHGINTVRIPVGWWIAFDPDPPSPFIGGSLEALDNAFSWAQEYDIKCIIDLHAAPGSQNGMEHSASRDGFTGWPTSPDYISESLHVIEFLISRYAKHQALLGIELLNEPSAGTVPLDILISYYKRGYQIVRKYSSSAYVILCQRIGLADPLELYQANIGSTNLVLDLHFYNLFDTFFVNMSAGDNVQYIYKSREGLLQAFNDSNGPLIFIGEWVNEWNVASGSQTDYQDFGKAQLEVYNAASFGWCYWTLKNDREHWDFEWNIRNNYLQLGNSPSKQNIYTLGLFALVYTWFCLLHFL 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02092 471 SUPERFAMILY (Trans)glycosidases 134 442 IPR017853 -
Car05g02092 471 SUPERFAMILY Actin-crosslinking proteins 7 130 IPR008999 -
Car05g02092 471 Pfam Cellulase (glycosyl hydrolase family 5) 165 426 IPR001547 GO:0004553|GO:0071704
Car05g02092 471 PANTHER - 1 450 - -
Car05g02092 471 PANTHER FASCIN 1 450 IPR010431 GO:0007015|GO:0051015
Car05g02092 471 ProSitePatterns Glycosyl hydrolases family 5 signature. 274 283 IPR018087 GO:0004553|GO:0005975
Car05g02092 471 Gene3D - 2 125 - -
Car05g02092 471 Gene3D Glycosidases 126 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02092 Car-Chr5 66137845 66142002 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02092 - - gmx:100809472 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02092 05 66137845 66142002 Car05g02092 05 66137845 66142002 ECH