Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02072 ATGGCTTCCCGCGGCGGCGCACCACCGGCGGAGGCTTTTCTAGCCTCTGGTCGTAAGTCCGAGAAGCTAAGCCTCACATCTCTCCAATCAAAGATCAAGTGCGACCATGAAGGCTACGAATCAGAGTTACTCCTTGTCCGCAACCAATTCCACTCTTCCCTCGAACTATTTCAACAACAAGCCGCTATGAATTTCACTTCTATCTCGGGCATCGCAAGTGATCCCACCGTTGCCAAAGACCTTGCCGAAAGAGCTATGTTTCTTGCTCACGTTACTCCCTACTACCCTAACCACCTCGCCGATTTCCCTCGCCAACTCGCCGATTTACTTCGTTGCGCCGCGCGTACGCTTCCTTCTGGACTTCGTAATGACCTAGCGAAATCTCTTATCCTTCTTATTAATCGACAGATTGTTAATATTGGAGAAACTCTTTCGTTGTTCATGGAGCTTCAAACCCTAGGTGACGCTGAGCTGAAGAAGTTAGCATTTACTCACGTTGTTCAAAGCATAAAGCGCATGAACTTAAAGCATAAGGACGAAGCGAAAAACCGTGCACTACAGAATGTCATTTTTAACATGCTACAGCAAGAGGATGAAGGTCGGGCCAAGAGGGCACTTGTGATTTTATGCGAGCTTCACAAGAAACAAATATGGTTTGATGAGAGAACAGCAAATGCTATCTGCACTGCTTGCTTCCATCCATCGTCAAGAATTATGATAGCCTCATTATGCTTTCTGCTTGATTATGAGAAGATTGAAAACTACCAAGATAGTGATGATTCAAGCAGTGACGATGAATCCACTGAATCACCTCAAGTTATTCTTAGAAGAGAGACAATTTATAAGGCAAACCACCAAGGTACGTCAGCTAGCAAAAAGAGAAAGAAAAAGAAATTAGACCGCATAATGCGCAGCATGAAAAAGAAACAGCGCGTTTCATCTGAAAGGAGCAACAACATCTATTATTCACCACTCAACCATCTGAAAGATGCCCAGGGTTTTGTTGAGAAGCTGTTCTCGCGTCTGCAGAAATGTAATGATCGATTTGAGGTCAAGATGATGATGTTGAAAGTGATTGCTCGAACAGTTGGGCTTCACCAGTTAATTTTGTTAAACTTTTACCCTTATCTTCAGAAATATATCCAGCCCCATCAACGAGACGTTACGAATTTGCTTGCTGCAGTGGTTCAGGCTTGCCATGATATGGTTCCTCCTGATGCAGTTGAGCCCTTGTTCAAACAAATTGTAAATCAATTTGTACATGACCGCTCACGTCCAGAGGCTATCACTGTTGGAATAAACTCAGTCAGGGAGATATGCTTGCGTATGCCACTGTTAATGAATGAAGACCTACTACAAGACCTTGCCCTATATAAGAAGTCACACGAGAAGGCAGTTTCAATTGCAGCTCGATCTCTGATTACAGTATTCCGACAGGTTTGCCCTTCACTGCTAGTTAAGAAGGACCGAGGGCGGCCCACTGACCCTGAGGCAAGACCAAAGGCTTATGGAGAAGTCAATGTTGCAACTGATGTTCCTGGTGCTGAGTTGTTGCAGACCAATGACGATGATGTTGAACAGGAGACCAATGATTCATTATGCAGTGGCTCAGACAATGACCAGGAAGATGACCAAATAAGTATAAATCCTGATGATGAGAACCAGCtaggaagtgataatactgaaagcgatgatgatgaagctatagatcatgatgttgtaacagaagatgaaaatgatagtagttttgattatgaaaccggtgttgatgatgctgatgacgttgaagatgatctagaagacggcgaagatgagtcggatgaagatgatggtgagatttcggaacatggagatgatgaTCCGCATACATTTAGTCATGATGGAAGTGTGGAGACAAAAGCTACATTGAAAGACTCAGCAAAAAAAAGGAAGTTTAGTGATTTCAATGCTCAACTTACAGCTGCTGATACAAGTCTCCGGGCTTTGAAGAAATTGGCAGGGACAACAACGGAAAATGTCCTACCAGAAAATGAAGATGGAATTCTTTCTAATGCAGACTTCCAGAGGATCAGGGAACTAAAGgcaagaaatgaagcaagaactgcattagcgcagcatgggctTCTAAAGTCATCAACAAATAAGATTCCAAGCTCTGATCAATTAAGTTTAAAGCGAGTGGATGGTTCCATGCTTGAAGTTCATGTAAAGAAAAAGCTTAACAAGGCAGAGAGGCTAGCTATGGTTAAAGCAGGGAGGGAGGAAAGAGGACAGTACCATGCTCGAGCAGCTGTGAAACAGAAAAAGACGGGTGGTCTAAGTAACCGACAAAAGGAACACAAGAAAAGTATGCCTTTAGCTGCAAAGAGAAACAGGGTAGCAAGATCTCAGGTGGAGAAAAGGAAAAAGAAGCAGCAGTCCGGTAAACAGTTCCGTGGGAGGAAAGCGTGGCAATAG 2457 0.3972 MASRGGAPPAEAFLASGRKSEKLSLTSLQSKIKCDHEGYESELLLVRNQFHSSLELFQQQAAMNFTSISGIASDPTVAKDLAERAMFLAHVTPYYPNHLADFPRQLADLLRCAARTLPSGLRNDLAKSLILLINRQIVNIGETLSLFMELQTLGDAELKKLAFTHVVQSIKRMNLKHKDEAKNRALQNVIFNMLQQEDEGRAKRALVILCELHKKQIWFDERTANAICTACFHPSSRIMIASLCFLLDYEKIENYQDSDDSSSDDESTESPQVILRRETIYKANHQGTSASKKRKKKKLDRIMRSMKKKQRVSSERSNNIYYSPLNHLKDAQGFVEKLFSRLQKCNDRFEVKMMMLKVIARTVGLHQLILLNFYPYLQKYIQPHQRDVTNLLAAVVQACHDMVPPDAVEPLFKQIVNQFVHDRSRPEAITVGINSVREICLRMPLLMNEDLLQDLALYKKSHEKAVSIAARSLITVFRQVCPSLLVKKDRGRPTDPEARPKAYGEVNVATDVPGAELLQTNDDDVEQETNDSLCSGSDNDQEDDQISINPDDENQLGSDNTESDDDEAIDHDVVTEDENDSSFDYETGVDDADDVEDDLEDGEDESDEDDGEISEHGDDDPHTFSHDGSVETKATLKDSAKKRKFSDFNAQLTAADTSLRALKKLAGTTTENVLPENEDGILSNADFQRIRELKARNEARTALAQHGLLKSSTNKIPSSDQLSLKRVDGSMLEVHVKKKLNKAERLAMVKAGREERGQYHARAAVKQKKTGGLSNRQKEHKKSMPLAAKRNRVARSQVEKRKKKQQSGKQFRGRKAWQ 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02072 818 MobiDBLite consensus disorder prediction 285 312 - -
Car05g02072 818 MobiDBLite consensus disorder prediction 557 615 - -
Car05g02072 818 PANTHER HSDA/SDA1-RELATED 21 817 IPR027312 GO:0000055|GO:0042273
Car05g02072 818 MobiDBLite consensus disorder prediction 520 638 - -
Car05g02072 818 MobiDBLite consensus disorder prediction 755 818 - -
Car05g02072 818 Pfam SDA1 447 815 IPR007949 -
Car05g02072 818 MobiDBLite consensus disorder prediction 288 305 - -
Car05g02072 818 SUPERFAMILY ARM repeat 85 488 IPR016024 -
Car05g02072 818 MobiDBLite consensus disorder prediction 772 786 - -
Car05g02072 818 PANTHER PROTEIN SDA1 HOMOLOG 21 817 - -
Car05g02072 818 Pfam NUC130/3NT domain 87 138 IPR012977 -
Car05g02072 818 MobiDBLite consensus disorder prediction 616 638 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02072 K14856 - gmx:100816774 1158.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02072 05 65976173 65981442 Car05g02072 05 65976173 65981442 ECH