Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02071 ATGAATCCTTTGTGCTGCATTGCTCCGGTTTCGATCGATCGGGACCGTGGTAACCCTGTCGTGGCCAAATCGAATTCTCAGTATCAATTAGGGCTTGATTCGTCGATCAAAACAGTGAACTCCGCTTCCAAATCGAGTTTATCAACTCATGATTCATCGATCGCTGTGGATTCCGTTAAATCGTCCTCCGCGGGTTTGAATCACGACGACGAGGATGCTGTTCACGAGCCTAGGGATTCTAAGGTGTTTGCCGGCGGTAATGGCGGCGGTGTTGCTGGCAGTGTGGCGGGGATTTTGTATAAGTGGGTGAATTACGGTAAGGGTTGGAGGTCTAGGTGGTTTGTGTTGGAAGATGGTGTGCTTTCTTATTACAAGATTCATGGACCGGATAAGATCTTGACGAGTCCTGCTAAGGATAGGAGTGTTAGGGTGATCGGAGAGGAGTCGTTGAAGTACACGAGAAAGGCGAATTGGAACTTGAATCGAGCTTCTGGTGTTGTAGTTGGAGGAGGAGCTACCAAGCAATGCAAACCCTTCGGTGAGATACATTTGAAGGTTTCTTCAGTTCGCTCCAGCAAGTCTGATGATAAGCGGCTTTCCGTATTTACTGGGACAAAAACTCTTCACTTGAGGTGTGTATCTAGAGAAGACAGAGCCATGTGGATTGAAGCCCTGCAGTCTGCAAAAGATCTTTTTCCTAGAGCTCTGACAAGCAGTGATCTTGCAACTCCAGAAGATATTGTAGTTTCGACAGAGAAGCTGCGATCAAGATTATCACAGGAAGGCATAAATGAAGAAATCATTAATGACTGTGAATCTATTATGCTATCTGAAGTCTCATATCTTCAAGGCAAGTTGAAGTTTCTTCAGCAGAAACATGTTATGTTGTTGGACACCTTAAAACAACTGGAGACGGAGAAAATAGAGTTGGAAACTACTGTAGTAGATGAAACAAAAGAACGCGAGTCATATTGCGGACAAGGAAATAGAAGATTTAGTGATTTCTATTCTGTTATGTCGGAGGGCAGTGCTACAGATTCAGTTGCAGATAATGAAAGCCAAGATGGAGGAGACGCTGAAACAGATGATGATGATGGAACATATTTTGATACTAATGAGATTTTATATTCAGATGCCTTAAGAAGTGCTTCCTATCGAAGTAGAGAAGGTACGGGAAATGCCAGTATATATGATAGAGATTATATTCTTCATGACAGTTTGCATGGGTTTGAGAAGGCAATTAAAGATATAAGCTATCCTTATGTCAAAAGAAGGGATAATTTACCAGAACAGAAAGAGAAAGAGAAACCAGTTGGCTTGTGGTCAATTATTAAAGACAATATAGGGAAGGATCTTTCTGGAGTTTGTCTCCCTGTTTATTTTAATGAACCACTCTCTTCATTGCAAAAGTGTTTTGAAGACCTGGAGTACTCAATCCTAGTTGATAGAGCATTGGAGTGGGGAAAGCAGGGGAATGAATTGATGAGAATTCTAAATATTGCAGCATTTGCTGTGTCTGGCTATGCGTCCACTCAAGGTCGACAATGTAAACCTTTCAATCCTCTACTTGGGGAGACTTATGAAGCTGACTATCCAGATAAAGGACTGAAGTTTTTTTCTGAGAAGGTCAGTCACCATCCAATGATTGTTGCTTGTCACTGTGAGGGAAGAGGATGGAAGTTCTGGGCAGACTCCAATTTGAAAGGAAAGTTTTGGGGGCGATCTATTCAGTTAGATCCTGTGGGCGTTCTCACCCTACAGTTTGAGGACGGTGAAACATTTCAGTGGAGCAAGGTCACCACTTCCATATACAATATTATACTAGGTAAAATTTATTGTGACCACTATGGTACTATGCACATCAAGGGCAGTGGAAACTACTCTTGCAAATTGAAGTTCAAAGAACAATCTATCATAGACCGCAATCCACATCAGGTCCATGGGTTTGTTCAAGACAACAGAACTGGAGAGAAGGTAGCAATGTTAATTGGTAAGTGGGATGAAGCAATGTACTATGTACTCGGGGATCCAACTACAAAGCCCAAAGGTTATGATCCAATGACAGAAGCTGCGTTATTGTGGGAAAGAGACAACTATGTTCCAAAAACGAGATACAACCTTTCTCCCTTCGCAATTTCCTTGAATGAAATAATGCCTGGTTTATTGGAGAAGTTGCCTCCAACTGACTCTAGATTGAGACCAGATCAGAGACATTTAGAAAATGGAGAATATGAGTTTGCAAATGCAGAGAAGCTAAGGCTTGAACAGTTGCAGAGACAGGCAAGAAAGATGCAAGAAAGAGGATGGCGGCCCAGATGGTTTAAGAAGGATGAGGATGGTTCTTACCGATACATGGGTGGTTATTGGGAGGCAAGAGAGAAAAATCATTGGGATGGAATCCCTGATATATTTGGACAAGGTTGTGATTTGCCTTCATGTTCTGAAGAGACTTTATCCTACTGA 2463 0.4222 MNPLCCIAPVSIDRDRGNPVVAKSNSQYQLGLDSSIKTVNSASKSSLSTHDSSIAVDSVKSSSAGLNHDDEDAVHEPRDSKVFAGGNGGGVAGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILTSPAKDRSVRVIGEESLKYTRKANWNLNRASGVVVGGGATKQCKPFGEIHLKVSSVRSSKSDDKRLSVFTGTKTLHLRCVSREDRAMWIEALQSAKDLFPRALTSSDLATPEDIVVSTEKLRSRLSQEGINEEIINDCESIMLSEVSYLQGKLKFLQQKHVMLLDTLKQLETEKIELETTVVDETKERESYCGQGNRRFSDFYSVMSEGSATDSVADNESQDGGDAETDDDDGTYFDTNEILYSDALRSASYRSREGTGNASIYDRDYILHDSLHGFEKAIKDISYPYVKRRDNLPEQKEKEKPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSILVDRALEWGKQGNELMRILNIAAFAVSGYASTQGRQCKPFNPLLGETYEADYPDKGLKFFSEKVSHHPMIVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMHIKGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLIGKWDEAMYYVLGDPTTKPKGYDPMTEAALLWERDNYVPKTRYNLSPFAISLNEIMPGLLEKLPPTDSRLRPDQRHLENGEYEFANAEKLRLEQLQRQARKMQERGWRPRWFKKDEDGSYRYMGGYWEAREKNHWDGIPDIFGQGCDLPSCSEETLSY 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02071 820 Gene3D - 736 799 - -
Car05g02071 820 Pfam Oxysterol-binding protein 440 793 IPR000648 GO:0008289
Car05g02071 820 Gene3D - 525 691 - -
Car05g02071 820 MobiDBLite consensus disorder prediction 343 367 - -
Car05g02071 820 Pfam Pleckstrin homology domain 97 227 - -
Car05g02071 820 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1D 2 809 - -
Car05g02071 820 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 809 IPR000648 GO:0008289
Car05g02071 820 Coils Coil 747 767 - -
Car05g02071 820 Gene3D - 92 232 IPR011993 -
Car05g02071 820 SUPERFAMILY PH domain-like 96 234 - -
Car05g02071 820 SUPERFAMILY Oxysterol-binding protein-like 434 805 IPR037239 -
Car05g02071 820 SMART PH_update 93 232 IPR001849 -
Car05g02071 820 Coils Coil 286 320 - -
Car05g02071 820 MobiDBLite consensus disorder prediction 353 367 - -
Car05g02071 820 ProSiteProfiles PH domain profile. 92 230 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02071 Car-Chr5 65966825 65975387 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02071 K20456 - gmx:100817856 1492.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02071 05 65966825 65975387 Car05g02071 05 65966825 65975387 ECH