Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02063 ATGGCAGCAACAACAATGGCAATGATGATCAACTCAAAGTGTCTAAACACAACCATACCCAAGTTACAAAACCCCACCACAACCACTAAACTAACCACAAATTTCAAAGCCACCACCATTCAGAATCTACCAAAGGGTCTATTCTCTTCAATTGAGAACACCAACGTGGTTTCACCTTCCATTGCAATCGCGGGCGCACTATTCTCGTCCCTTGCAACCTGTGACGCAGCTTTCGCAGCTCAACAAATAGCTGAAATTGCGGAAGGTGATAACAGAGGATTAGCTTTGTTGTTGCCATTGGTTCCAGCCATAGGATGGGTTTTATTCAACATTCTCCAGCCAACTTTGAACCAAATCAACCGTATGCGTAGCACAAGAGGGGTGATTAttgggcttgggcttggacttggtgggcttgcagcttcggGTATGATGTCAGCATCTGCTAGTGAAATGGGTCTGATTGCTGATGCTGCTGCAGCTGGAAGTGACAACAGGGGACAGCTTCTGTTGTTTGTGGTTTCACCAGCTATTCTTTGGGTGCTTTACAACATTTTGCAGCCAGCTCTCAACCAGATCAATAGGATGAGATCTGATTAA 600 0.4167 MAATTMAMMINSKCLNTTIPKLQNPTTTTKLTTNFKATTIQNLPKGLFSSIENTNVVSPSIAIAGALFSSLATCDAAFAAQQIAEIAEGDNRGLALLLPLVPAIGWVLFNILQPTLNQINRMRSTRGVIIGLGLGLGGLAASGMMSASASEMGLIADAAAAGSDNRGQLLLFVVSPAILWVLYNILQPALNQINRMRSD 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02063 199 Hamap Photosystem II protein Y [psbY]. 90 124 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Car05g02063 199 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 198 IPR038760 GO:0009523
Car05g02063 199 Pfam Photosystem II protein Y (PsbY) 164 196 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Car05g02063 199 Pfam Photosystem II protein Y (PsbY) 90 122 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02063 Car-Chr5 65868663 65869859 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02063 K02723 - zju:107428525 215.698