Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02058 ATGGCTTCGTATTCTGAAGAAGATGGAAAGCCTCTACCGAAGTTTGGGGAATGGGATGTAAATGATCCTTCTTCAGCTGAAGGATTCACTGTTATATTCAACAAAGCCAGAGATGATAAGAAAGTTGCTTCTGCTTCGGGTCGATTTCCTTCCCAACGAAGAAATGACTCTCGCGCACGCAAGGataataataataataataataaaaaataCAACAAAACTTCCTCCTCTACTAAGAAAAAGTGGTTTTGCTTTACCGTCTAG 264 0.3864 MASYSEEDGKPLPKFGEWDVNDPSSAEGFTVIFNKARDDKKVASASGRFPSQRRNDSRARKDNNNNNNKKYNKTSSSTKKKWFCFTV 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02058 87 MobiDBLite consensus disorder prediction 1 24 - -
Car05g02058 87 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 85 IPR040387 -
Car05g02058 87 MobiDBLite consensus disorder prediction 40 77 - -
Car05g02058 87 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 7 41 IPR008700 -
Car05g02058 87 MobiDBLite consensus disorder prediction 53 67 - -
Car05g02058 87 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02058 Car-Chr5 65837525 65838375 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02058 - - gmx:102669045 112.079