Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car05g02053 | ATGGCTGAAACTTCGACTCTTCTCGTTCGATCTTTCTCCACTCCCGTTGACACTAGTTGCGCACTCCACGAGAGTAACCCTCTTCGGGCTCTCGGAGAATCTATCTCTTTTGGAAGGTTTATGACAGAAAGCTTGAATTGGGAGAAATGGTCAACATTTACGCAGAATCGCTACGTGGAGGAAGCTGAAAAATATTCGAAACCAGGTTCTGTTGCTGCCAAAAGAGCCTACTTTGAGGCTCATTATAAGAGAAAGGCTGCGGAGAAAGATGCTGCGTTGGTCCAAGAAGCAAATGCTCAAGCTAATGAAACTTTTGAATCGGAAACTAGGGAACGAAACTGCGCAGACTCATCCGAACAGATAAAGTTGGAAGCTGACAATATTGAGACAGCCAATGAAGAGATAAATAATGATACTGTCAATTACCAAGGTGTTGATTGTGACTGTGATGCAAACCAATGTAAATGTGACGTTGGAGAAAATGATTTAGATATTTCTGAGGTGGAAGGAATAGAGGAAGTCCTACGACCCTACAACGATATCAATCTTGATGTGGAGCAAAACTGTACTGACTCATCCGAACAGAAAAAGTCAGATGATGGCAACATTGAGGCAGCCAATGAAGATACTGTCAATTACCTAGTGGTTGACTGTTATGATACAAACCAACATAAATTTGATGTTGGACAAAATGATTTAGATGTTTCCCATGTAGAAGGAACAGAGGAAGTCCTACATCCTTGCAATGATATGAATCTTGATGTGGAATGTTGTGTGCTTGTTGATAATTCTAATCAGCTTGATCATGTTGAAGTCCATAAGAATATTGATGTTCCTGTTGAAGAGACAGCGCCTGATCCTGGCATTACCGATCAAGAAGTTTTGGCTTTATCCGTCAAGGAAAGAGAAGTAAATTCTTCTCCAAAATCATCAGCCAAAATTAGGGCTGACAAACTGCCTCATTCCCGTGATGAAAGGAAGGCTTTTATTGCTGTACCACCGAGAAGTAGAATAAACTGTGGTTTGAAACGTGAGAACTCTATTGGAGATGCAGTTGAGAGGAAGATACTAACTGCACGGTCACTCCACACGTCAATCAATCTTCCTTCTAGCACCGCTGTAACAAGCAAAACAGGTGATGCATCTTTAAGATCCAGATATGGAATTCACAGATTTTCAACAAGTAAGAGCTCTGTTGGAAGCTTAGTTGAGAAGAAGAGATTGACTACATCATCACATTACATGTCAATCAATGTTCCATCTGGCACTGGGGTAGCAAGTAAAACAACTACCACAGCGCTTAAACCCAGCAACAGAATGAACATTGTTCCAAAAAGTATTGGAGCCTCATTGGAGAAGAGACCAATTACAAGGTCACTCCACATGTCAATCAATCTCTCTTCTGGTGCTGGTATAACAAGTAAAACAACTTCAATGATTGAACATAACAGTATTAAAAAAATTCATGGTGGTTTGCCCAAAGTTCATCCAGTGGCATCACAGACATCAACTGAGGCATCTCGTGGTTTGTCAAATCAAGCTCCAGCAAATCTTCCTTCTGTGGGCAGAAGCTGCCTGAAATCTTCAAGCACCACTAAAAGCAATCCCCGGTCAGCTACCATATCATCACCTTTTAGATTTAGAAGTAATGAAAGAGCAATAAAACGCAAAGAGTTCTTGCAGAGGATGGATAAAACTAAATCCAAGGAAGAAGAGAAAGTTCAATTGCAAAGGATATCAAAGGATAAAACAGAGCATGATCACCAAAAGCAGAGCAGTGGCACGAAATCAAAACAAAATGATGATGGCCTAAGTGGATCACAATCATCAAGCAATCAGACTAGAAAGATCTCACTTACATCGACCCTGTCACCAAGGCTAGTGAGGAAAGCAAGTTCTAGTACAACAAAAAACTTGGGAAGTTCATGGAAGCCTCCAATCAGCGCTAATAATTCCAAACGTATTTCAGAAAAAAACAACCAAACAACAAGGCAATCAGGAACTTCATTATCAAAAACCAGGCTGGAAAATGCTTCTCCAAATATTCAGCATTGA | 2055 | 0.4058 | MAETSTLLVRSFSTPVDTSCALHESNPLRALGESISFGRFMTESLNWEKWSTFTQNRYVEEAEKYSKPGSVAAKRAYFEAHYKRKAAEKDAALVQEANAQANETFESETRERNCADSSEQIKLEADNIETANEEINNDTVNYQGVDCDCDANQCKCDVGENDLDISEVEGIEEVLRPYNDINLDVEQNCTDSSEQKKSDDGNIEAANEDTVNYLVVDCYDTNQHKFDVGQNDLDVSHVEGTEEVLHPCNDMNLDVECCVLVDNSNQLDHVEVHKNIDVPVEETAPDPGITDQEVLALSVKEREVNSSPKSSAKIRADKLPHSRDERKAFIAVPPRSRINCGLKRENSIGDAVERKILTARSLHTSINLPSSTAVTSKTGDASLRSRYGIHRFSTSKSSVGSLVEKKRLTTSSHYMSINVPSGTGVASKTTTTALKPSNRMNIVPKSIGASLEKRPITRSLHMSINLSSGAGITSKTTSMIEHNSIKKIHGGLPKVHPVASQTSTEASRGLSNQAPANLPSVGRSCLKSSSTTKSNPRSATISSPFRFRSNERAIKRKEFLQRMDKTKSKEEEKVQLQRISKDKTEHDHQKQSSGTKSKQNDDGLSGSQSSSNQTRKISLTSTLSPRLVRKASSSTTKNLGSSWKPPISANNSKRISEKNNQTTRQSGTSLSKTRLENASPNIQH | 684 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car05g02053 | 684 | MobiDBLite | consensus disorder prediction | 489 | 684 | - | - | |
| Car05g02053 | 684 | MobiDBLite | consensus disorder prediction | 596 | 684 | - | - | |
| Car05g02053 | 684 | MobiDBLite | consensus disorder prediction | 497 | 547 | - | - | |
| Car05g02053 | 684 | Coils | Coil | 118 | 138 | - | - | |
| Car05g02053 | 684 | Coils | Coil | 84 | 104 | - | - | |
| Car05g02053 | 684 | PANTHER | TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED | 392 | 684 | IPR044216 | - | |
| Car05g02053 | 684 | PANTHER | TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED | 1 | 209 | IPR044216 | - | |
| Car05g02053 | 684 | PANTHER | TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED | 188 | 382 | IPR044216 | - | |
| Car05g02053 | 684 | PANTHER | TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY | 392 | 684 | - | - | |
| Car05g02053 | 684 | PANTHER | TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY | 1 | 209 | - | - | |
| Car05g02053 | 684 | PANTHER | TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY | 188 | 382 | - | - | |
| Car05g02053 | 684 | MobiDBLite | consensus disorder prediction | 549 | 595 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Car05g02053 | Car-Chr5 | 65785221 | 65789580 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car05g02053 | - | - | cam:101494186 | 1348.57 |