Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02052 ATGGCACAATCTTTATCCTCTAATCTAGGTCTTAACCCGGCCATGGTTTCCAAGAGTTCATCAAGCACCTCAAGATCAACCCATTTTCTTCTATTGCAAAAGGTAAAGCCCCTCAGAGCCATGACAGGGGACGCAAGAGAAAAACTCAACCATGTCTCAAGAGACATCAACAATACCAACCACCAATCCCAACCCAAAAGAAGAACCGTTCCTTCCGCACCCATAGGGTTATGGGATCGATTTCCTACAGCAAGAACAGTACAAGAGATGATGGAGACAATGGAAAGAATGATGGAAGATCCATTTGCAATGAGCACACTTGAGTGGCCATCATCACCTCTTCCAAGTGAAGGAGCAGGTGGATATCGAAGGAGGGGAAGAACACCATGGGAGATTAAAGAAGGAGAAATTGAATACAAGATGAGGTTTGACATGCCTGGTATGAAAAAAGAAGATGTGAAAGTGTGGGTTGAAGAGAAGAAGATGCTTGTGGTTAAAGCTGAGAAGGGATCCaagaagaagaagattggagaagaagagatggtgaaagaagaaggagaTGTTGATGAATGGTGTTCTAAGAGCTATGGTAGATATAGTGGCAGAATTGTTTTGCCTCAGAATGTGGAGTTTGAGAATATTAAGGCAGAGGTTAAGGATGGTGTTCTTTACATTATAATTCCTAAGGCTTCTAGCTCCTCCAAAGTCTTGAATTCTAGTGTTCAATGA 729 0.3978 MAQSLSSNLGLNPAMVSKSSSSTSRSTHFLLLQKVKPLRAMTGDAREKLNHVSRDINNTNHQSQPKRRTVPSAPIGLWDRFPTARTVQEMMETMERMMEDPFAMSTLEWPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMKKEDVKVWVEEKKMLVVKAEKGSKKKKIGEEEMVKEEGDVDEWCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPKASSSSKVLNSSVQ 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02052 242 CDD ACD_sHsps-like 131 229 - -
Car05g02052 242 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 242 - -
Car05g02052 242 MobiDBLite consensus disorder prediction 48 75 - -
Car05g02052 242 MobiDBLite consensus disorder prediction 1 26 - -
Car05g02052 242 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 242 IPR044587 GO:0009408
Car05g02052 242 MobiDBLite consensus disorder prediction 55 69 - -
Car05g02052 242 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 121 242 IPR002068 -
Car05g02052 242 SUPERFAMILY HSP20-like chaperones 109 233 IPR008978 -
Car05g02052 242 MobiDBLite consensus disorder prediction 106 125 - -
Car05g02052 242 Gene3D - 82 238 IPR008978 -
Car05g02052 242 Pfam Hsp20/alpha crystallin family 131 235 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02052 Car-Chr5 65777564 65779427 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02052 K13993 - gmx:100811966 273.478