Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02050 ATGTTCAAAAAGGTATTCAGTAAACTTCCTAAAAAGTCACAAAAAAGTTCGGAGAATCGCGAACAAGGTGGAACTCCAAGAAGCCATGGTGTTTCAACCTCAAAAAACAGTGAAAATATTACACAACAAGGTAGCAACAAAACCGGTAAttcttctacttcttcttcttTGAATGTAGGACAAGGACAGTATAATAATAATCATGGTAACAAAGGTTCATCATTACCTTTGTTTGTGAATGAAAATTCCAATGGTAATTTCAATTCTTATGAAGCATTACCAGCATTTAGGGATGTTCCCAATTCTGAGAAACCAAGTTTGTTTATTAAAAAGCTTAAGATGTGTAGTGTTGTTTTTGACTTCACTGACCCTACTAAACACCTCAAAGAAAAAGAGATTAAGAGACAAACTTTGGTGGAACTTGTTGATTATGTGTCTTCTGTTAATGCTAAATTCACTGAGAATGTAATGCAAGAGGTTGTGAAAACTGTGTCTGCAAATATATTCAGAACACTCAGTCCTCAACCGCGTGAAAACAAACTCGTTGATGGTCTCGAGGTTGAGGAGGAGGAGCCTTCAATGGATCCTTCTTGGCCTCATTTGCAAGTTGTTTATGAGCTTTTCCTTAGATTTGTGGCATCACCTGAGCTGGATGCAAAGTTGGCTAAGAGATTCATTGATCAGTCCTTCATTTTGAGGCTTCTGGATTTGTTTGATTCTGAAGATTCTAGAGAAAGGGAGTACTTGAAAATGACGCTGCACCGCATCTACGGTAAGTTAATGGCACATCGCCCTTTCATCAGGAAATCAATCAATAACACCTTTTTGAATTTTATTTTTGAGACTGAGAAGCATAATGGGATTGCTGAGTTCTTGGAAATTTTGGGGAGTATCATCAATGGTTTTGCGTTGCCATTGAAAGAAGAGCATAAATTGTTTCTGGTTCGTATATTGATTCCATTGCACAAGCCGAAGTGCTTAGCAATGTATCATCAGCAGTTATCTTATTGCATTACTCAATTTGTGGAGAAAGACTGCAAGCTTGCTGATACGATCATTAGGGGGTTACTGAAGTACTGGCCAATAACAAATAGTTCAAAGGAAGTTATGTTCCTTAGTGAGTTGGAAGAAGTCTTAGAAGCAACTCAACCTCCGGAGTTCCAGCGATGTATGGTGCTATTGTTTCACCGTGTTGCTCATTGTTTGACTAGCCCTCATTTTCAGGTCGCGGAAAGAGCTTTGTTCTTGTGGAATAATGATCACATTGTGAACTTAATAAAACAAAACTGCAAAGTGATACTGCCAATCATGTTCCCTGCACTGGAGAGAAATATTAaaactcattggaatcaagctgtccacagtctgactttaaatgttcagaagatttttcacgatttcgatcccgatctgtataaagaatgcttacaaaagtttgagcaagatgaatcaaaggaaggtgaagtgacagcAGGACGCGAAGCCACGTGGAGACGTTTGGAGGAGCTTGCCGCGAAGAAAGCTACGAGTAGCGAAGCCGTGCTTGTTGGAAAAGCACTCACTCGCAAATCGGCAGGCTAA 1581 0.3567 MFKKVFSKLPKKSQKSSENREQGGTPRSHGVSTSKNSENITQQGSNKTGNSSTSSSLNVGQGQYNNNHGNKGSSLPLFVNENSNGNFNSYEALPAFRDVPNSEKPSLFIKKLKMCSVVFDFTDPTKHLKEKEIKRQTLVELVDYVSSVNAKFTENVMQEVVKTVSANIFRTLSPQPRENKLVDGLEVEEEEPSMDPSWPHLQVVYELFLRFVASPELDAKLAKRFIDQSFILRLLDLFDSEDSREREYLKMTLHRIYGKLMAHRPFIRKSINNTFLNFIFETEKHNGIAEFLEILGSIINGFALPLKEEHKLFLVRILIPLHKPKCLAMYHQQLSYCITQFVEKDCKLADTIIRGLLKYWPITNSSKEVMFLSELEEVLEATQPPEFQRCMVLLFHRVAHCLTSPHFQVAERALFLWNNDHIVNLIKQNCKVILPIMFPALERNIKTHWNQAVHSLTLNVQKIFHDFDPDLYKECLQKFEQDESKEGEVTAGREATWRRLEELAAKKATSSEAVLVGKALTRKSAG 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02050 526 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 93 504 IPR002554 GO:0000159|GO:0007165|GO:0019888
Car05g02050 526 MobiDBLite consensus disorder prediction 19 76 - -
Car05g02050 526 PIRSF PP2A_B56 1 525 IPR002554 GO:0000159|GO:0007165|GO:0019888
Car05g02050 526 SUPERFAMILY ARM repeat 105 486 IPR016024 -
Car05g02050 526 Gene3D - 100 503 IPR011989 -
Car05g02050 526 MobiDBLite consensus disorder prediction 1 76 - -
Car05g02050 526 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 525 - -
Car05g02050 526 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 525 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02050 Car-Chr5 65759699 65765336 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02050 K11584 - gmx:100811438 835.099