Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02049 ATGACGGAAAGTGAGGGAAAGCGTGAGAAAATGGAAAAACTCAAGAAAGGTGGCGGTAGAGGAGGCCTCATCGCCTTCACCGGAACTGCTGCGGTGCTCGCTATCGCCGTTAACCTCGTTATCACCGCCATCAAACACCAGAACGCAAAAAATGCAAAGAAGAAAGATCTTGCAGGTTCTAAGGTGCGTGTTAACCTATCTGCATCTGAGATTGTTAAATTGACAAACCAAATCATTGCAAAGTCAAATGAGGTCCACAATTCCGTTGCATCGGTGCCTCTTGATAAGGTCACATACACAAATGTTATATCACCTCTAGCAGAACTCCAAGCGCAGCAATTTCCATTGATTCAATCTTGTTTGTTACCAAAGTTGGTATCTACCCGGGACGATGTGCGCAAAGCAAGTGCAGAAGCAGAGCGAAGAATAGATGCTCATCTCGACATTTGCAGCAAACGTGAAGACATATATATTGTCGTGAAAGCATTTGCAGTGAGGGGGGACTGGATGAATGCCGAAACCAAGAGCTTTGTTCAAGTTCTGGTGAGAGACTTTGAGCGAAATGGACTGAACCTCTCTGCAAGCAAAAGAGAAGAGTTGATGCGTCTAAGAGCTCAGATTGATGAGTTAAGCATTAAGTATATCCAAAATCTCAATGATGCTAGCACATTTCTTCTCTTCAATGAGGCAGAGTTAGCTGGATTACCTCAAGAGTTTCTCAAGGGTTTAGATAAATCTGAAAATGGACAATTGAAGATCTCCTTAAGAAGTCATCATGTCACAGCTGTACTCGAATTTTGCAAGGTAGGAACTACAAGAAGGATGGTATCACGGGCGTATGGAAATCGATGTGGAGAAGCTAATCTTTCTATTTTAGAAAGTCTGGTGCAACAGCGTCATAAATATGCTCGTTTACTTGGCTATTCGTGCTATGCCGAGTATGCCGTTGATGTTAGAATGGCAAAAACACCAACCAAGGTGTTTGAGTTTCTGAATGACATATCCGTACGTGTAACTGACTTGGCTATAAAAGAACTTGACATCTTGAAAGATTTGAAGAAAAAAGAGGAAGGGGAGTTTCCATTTGGAATTGAAGACCTACCATATTATATTAAACGGGTTGAAGATCAGAGTTACGATTTGGACTTTGGCGAGATCAAGCAATACCTACCAATTAATCTAGTTCTATCTGGAATCTTAAAAATTGTCCAAGATCTTTTTGGTTTAAGATTTGAGGAAATTGCAGGAGCTGAAGTTTGGCATTGCGATGTTCGTGTTTTTTCAGTGTTTGACTTGGGTTCAAGCGAACTCTTGGGTTATTGCTACCTTGATTTGTTTTCAAGGGAAGGAAAATATGGACACACTTGTGTGGTGCCTCTCCAGAACGGTGCATTAACAATCAGTGGAGCACGGCAGATACCAGTTGCATTACTAATATCTCAGTGTCAAAAGGATTCTGACTGTAGTCCTGGATTATTGCGGTTTTCTGAAGTGGTCAGTCTTTTCCACGAGTTTGGCCATGTGGTTCAACACATTTGCAACCGTGCTTCATTTGCTAGAATTTCTGGATTACGTGTTGATCCTGACTTTGTGGAAATACCTGCTCAACTGCTACAAAACTGGTGTTATGAAAGCTTTTCTCTAAAGTTGATATCTGGATTTCACCAGGATATCACAAAGCCCTTAAAGGATGACCTATGCAAATCAATTAAAAGATGGAGAAATTCTTCTTCTGCACTTAAATTGAAGCAAGAGATTTTATACTGTCTTTTTGACCAAATCATACATTCTACGGAAAACATAGATATTCAAGAGTTATTCAAGCATCTTCATTCCAAGGTAATGTTAGGTTTGCCGGTATTAGAAGGAACCAATCCGGCTTCATGTTTTCCTTTTAGTGTCGTTGGATATGAGGCAGCTTGCTACAGTCGCATATGGAGTGAGGTGTTTGCTGCTGATATTTTTGTCTCAACGTTTTGCAATGATGCTTCAAATCAGCAGCTTCCCGGCATGCAATTTAGGAATAAGGTATTGGCCCCCGGCGGAGCAAAGGATTCTGTTGAAGTGATATCGGACTTTCTAGGAAGAGAACCATCGATTCGAGCTTACGTTGAGAACAAAGCCAAAAATGGACTCCGAATTTCGGAAGATTCCTCCGGTTGCGTTAGAGCGGGAAGGAGTTTTACGGAGGAAGATTCTCAAGGCATTATTTGA 2214 0.4137 MTESEGKREKMEKLKKGGGRGGLIAFTGTAAVLAIAVNLVITAIKHQNAKNAKKKDLAGSKVRVNLSASEIVKLTNQIIAKSNEVHNSVASVPLDKVTYTNVISPLAELQAQQFPLIQSCLLPKLVSTRDDVRKASAEAERRIDAHLDICSKREDIYIVVKAFAVRGDWMNAETKSFVQVLVRDFERNGLNLSASKREELMRLRAQIDELSIKYIQNLNDASTFLLFNEAELAGLPQEFLKGLDKSENGQLKISLRSHHVTAVLEFCKVGTTRRMVSRAYGNRCGEANLSILESLVQQRHKYARLLGYSCYAEYAVDVRMAKTPTKVFEFLNDISVRVTDLAIKELDILKDLKKKEEGEFPFGIEDLPYYIKRVEDQSYDLDFGEIKQYLPINLVLSGILKIVQDLFGLRFEEIAGAEVWHCDVRVFSVFDLGSSELLGYCYLDLFSREGKYGHTCVVPLQNGALTISGARQIPVALLISQCQKDSDCSPGLLRFSEVVSLFHEFGHVVQHICNRASFARISGLRVDPDFVEIPAQLLQNWCYESFSLKLISGFHQDITKPLKDDLCKSIKRWRNSSSALKLKQEILYCLFDQIIHSTENIDIQELFKHLHSKVMLGLPVLEGTNPASCFPFSVVGYEAACYSRIWSEVFAADIFVSTFCNDASNQQLPGMQFRNKVLAPGGAKDSVEVISDFLGREPSIRAYVENKAKNGLRISEDSSGCVRAGRSFTEEDSQGII 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02049 737 PANTHER PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED 50 709 IPR045090 GO:0004222|GO:0006508
Car05g02049 737 Gene3D Neurolysin, domain 3 197 704 IPR024077 -
Car05g02049 737 CDD M3A_TOP 73 705 - -
Car05g02049 737 Gene3D Collagenase (Catalytic Domain) 391 541 IPR024079 GO:0008237
Car05g02049 737 Coils Coil 193 213 - -
Car05g02049 737 Gene3D Endopeptidase. Chain P; domain 1 40 187 IPR024080 -
Car05g02049 737 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 65 705 - -
Car05g02049 737 Pfam Peptidase family M3 267 706 IPR001567 GO:0004222|GO:0006508
Car05g02049 737 PANTHER SACCHAROLYSIN 50 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02049 Car-Chr5 65746548 65757102 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02049 K01392 - gmx:100793518 1130.55