Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02043 ATGGGTGGAGGTGACGAAAAGGGTCACCCCGAAAAATGTAGTAGTGATGTTGATGCTAGACAGAAGGCAATTGATGATTGGCTTCCCATAACAGCCTCGAGAAACGCCAAATGGTGGTATTCAGCTTTCCACAATCTCACGGCCATGGTTGGTGCCGGTGTTCTCAGTCTTCCATATGCAATGTCCAATATGGGCTGGGGTCCTGGCATTGTCATTCTTGTACTATCATGGGTCATTACATTGTACACCCTATGGCAAATGGTTGAAATGCATGAAATGGTTCCTGGAAAGAGATTTGATAGGTATCATGAGTTGGGTCAAGAAGCCTTTGGAGAGAAATTGGGTCTCTGGATTGTGGTTCCACAACAAGTTGTTGTTGATGTTGGCACATGCATTGTTTACATGGTTACCGGTGGTAAATCATTGAAGAAGGTTCATGATACTCTTTGCCCTGATTGCAAAGAGATTAGGACCTCTTATTGGATCATTATTTTTGCTTCTGTCAACTTTGTTCTTGCTCAGTCTCCTGACTTCAACTCCATTTCTGCCATATCTTTTAGTGCAGCTGCCATGTCTTTAACGTACTCAACCATAGCATGGACTGCTTCAGTTAAGAAAGGGGTGGTACCAAATGTAGACTATGGTCCAAGATCAACTAGCACCTCTGATAACGTATTCAACTTCCTATCTGCATTGGGAGATGTAGCATTTGCTTATGCAGGTCACAATGTGGTTCTAGAAATCCAAGCAACTATGCCTTCAACCCCTGAGGTTCCTTCAAAGAAACCCATGTGGAGAGGAGTTATTTTTGCATACATAGGAGTTGCCTTCTGCTACTTCCCTGTTGCAGTTATTGGATACTATATGTTTGGAAACTCTGTTGATGATAACATTCTCATCACACTCAAACACCCTACTTGGCTCATCGCCGCGGCTAACTTCTTTGTTGTTATCCACGTTATTGGAGGCTATCAGGTATTTGCAATGCCAGTGTTTGACATGCTTGAAACCGTCTTGGTTAAGGAATTAGATTTTGCACCTACTTTTAGTCTCCGACTAATAGTTCGCACTATTTATGTTGCATTGACAATGTTCACTGGCATATGCATCCCATTCTTTGGTTCTCTTCTAGGATTTTTAGGAGGATTTGCCTTTGCCCCAACAACTTACTTTTTGCCTTGTGTCATTTGGCTTAAACTCAAGAAACCCAAGAAATTTGGTTTGTCTTGGATAATTAACTGGGTATGCATTGTTCTTGGGGTCATATTAATGACACTATCCCCAATTGGTGCTATGAGGAATATCATCTTACAAGCCAAGGACTACAAGTTCTTCTCATAA 1341 0.4183 MGGGDEKGHPEKCSSDVDARQKAIDDWLPITASRNAKWWYSAFHNLTAMVGAGVLSLPYAMSNMGWGPGIVILVLSWVITLYTLWQMVEMHEMVPGKRFDRYHELGQEAFGEKLGLWIVVPQQVVVDVGTCIVYMVTGGKSLKKVHDTLCPDCKEIRTSYWIIIFASVNFVLAQSPDFNSISAISFSAAAMSLTYSTIAWTASVKKGVVPNVDYGPRSTSTSDNVFNFLSALGDVAFAYAGHNVVLEIQATMPSTPEVPSKKPMWRGVIFAYIGVAFCYFPVAVIGYYMFGNSVDDNILITLKHPTWLIAAANFFVVIHVIGGYQVFAMPVFDMLETVLVKELDFAPTFSLRLIVRTIYVALTMFTGICIPFFGSLLGFLGGFAFAPTTYFLPCVIWLKLKKPKKFGLSWIINWVCIVLGVILMTLSPIGAMRNIILQAKDYKFFS 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02043 446 PANTHER OS05G0424000 PROTEIN-RELATED 15 441 - -
Car05g02043 446 Pfam Transmembrane amino acid transporter protein 35 431 IPR013057 -
Car05g02043 446 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 15 441 - -
Car05g02043 446 Gene3D Amino acid/polyamine transporter I 31 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02043 Car-Chr5 65685060 65688385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02043 8 446 Organic Solute Cotransporters AT1G24400 75.000 0.0 675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02043 - - gmx:100786115 736.102