Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02040 ATGTTGGCACTTCTGCGAGCTCGTTGTGCGTCGAATTTTCACACTCTTCTTCAACCATGGAAGCTAGGGTTTTCCTCTCTGTCTACTACCATCAACATTGACGGCGGCGTCAGTAAATGCGTCCTGGATCTTCAAGAGATCGAGAAGGTTTTGACGGACGTTAAAGCCGATGACGTGAAGGTTATACCAGTTCCCGAACACTGCGATTGGGCTGATTATATGGTACTTGCCACTGGCAGATCAACCTGGCATGTAAAGAATATAGCTCAAGCCCTAATTTACAAGGCTAAGCAGAAGCAGAAAGGAGTTGAGCGAATGATGCTACCTAGTGTGGAAGGGTCAGAGGGTGGAAAGTGGATTGTCATTGACTCTGGGAAAGTGATAGTTCATGCACTTGATGAAAAAGCAAGAGCTTACTACAATTTGGAGAATCTTTGGACCCATGGGTCAATTCAACATGAGTCTACTGAGGATTTACAAAAAGTTTTGGTGAAGGTCCGGCGGAAAAACAATTCCAAGAAACCTGCCCAAAAGAATGCTTAA 543 0.4475 MLALLRARCASNFHTLLQPWKLGFSSLSTTINIDGGVSKCVLDLQEIEKVLTDVKADDVKVIPVPEHCDWADYMVLATGRSTWHVKNIAQALIYKAKQKQKGVERMMLPSVEGSEGGKWIVIDSGKVIVHALDEKARAYYNLENLWTHGSIQHESTEDLQKVLVKVRRKNNSKKPAQKNA 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02040 180 PANTHER IOJAP SUPERFAMILY ORTHOLOG 36 171 IPR004394 -
Car05g02040 180 Hamap Ribosomal silencing factor RsfS [rsfS]. 37 147 IPR004394 -
Car05g02040 180 SUPERFAMILY Nucleotidyltransferase 45 152 IPR043519 -
Car05g02040 180 TIGRFAM rsfS_iojap_ybeB: ribosome silencing factor 45 146 IPR004394 -
Car05g02040 180 Pfam Ribosomal silencing factor during starvation 46 146 - -
Car05g02040 180 PANTHER MITOCHONDRIAL ASSEMBLY OF RIBOSOMAL LARGE SUBUNIT PROTEIN 1 36 171 - -
Car05g02040 180 Gene3D Beta Polymerase, domain 2 42 170 IPR043519 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02040 - - gmx:100500386 278.1