Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car05g02034 | ATGAAACTGTGTCCGCGAGAAATCGAAAAACTAGAACTACACAATGCTGGGTACCTTGCACAGAAACGTCTCGCCCGTGGTTTGAAACTCAACTATACTGAAGCTGTCGCTCTCATAGCAACACAGATTGTGGAATTTGTTCGTAATGGTGATAAGAGTGTTGCAGAGCTAATGTCCATTGGGAGAGAACTATTAGGAAGGAGACAAGTTCTTTCAGCTGTTCCACATCTCTTGGAAACTGTTCAGGTTGAAGCTACCTTTTGTGATGGGACTAAGTTAATCACGGTTCATGATCCAATTGCTTGTGAAAATGGAAACCTTGAACTAGCATTATTTGGTTCTTTTCTTCCAGTACCTTCACTTGACATTTTTATGGAAAACAAAGAAGATGGTATCATTCCTGGTGAATTAAAATCTGAAGATGGAAGCCTAATTCTTAACCCTGGAAGGGTGGCAGTCTCTCTTAAAGTTGTAAACAATGGAGACAGGCCAGTTCAGGTTGGAAGCCACTATCATTTTATTGAAGTTAATCCCTACTTAATCTTTGATCGAAGAAAAGCATTTGGCAAGCGCCTTAATATAGCCTCTGGGACTACCACACGCTTTGAGCCAGGGGAAAGTAAAAGTGTTATACTTGTAAGCATTGGAGGTAACAAAGTCATCAGAGGAGGTAACAACATTGTTGATGGTCCAGTCAACGACTCCAGTTGCATAGCAGCCATGGAGGCTGTGAGAACAAGGGGATTCGGGCATTTGGATGAGGAAAATGCAAGGGAAGGTATTACTGGAGAAGACTATTCATTGACTAAATTAATTCCTCGGGAGGAATATGCTAACAAGTATGGCCCCACTATTGGTGATAAAATTCGTCTTGGTGACACTAACTTGTTTGTGGAAATTGAAAAAGATTTTGCTGTCTATGGTGATGAATGTGTTTTTGGAGGTGGTAAAGTCATAAGAGATGGAATGGGTCAGTCGTGTGGCCATCCACCTGATTGCTCTTTGGATACTGTTATAACAAATGCTGTGATCATCGATTATACTGGAATTTTCAAAGCAGATATTGGTATTAAAAATGGCCTTATTTCATCAATTGGGAAAGCAGGAAATCCAGACATTATGGATGGTGTATCTGTTAATATGATCATTGGGGCTAATACTGAAGTTATTGCTGGAGAGGGCTTGATTGTAACAGCTGGGGCTATAGATTGTCATGTACATTTTATATGCCCTCAATTAGTATATGATGCCATATCAAGTGGGATCACAACATTAATCGGAGGAGGAACAGGACCAGCTGATGGAACACGTGCAACAACATGCACACCAGCTCCGATTCAGATGCAACTGATGCTACAATCAACAGATGACCTGCCTCTGAACTTCGGTTTTACGGGAAAAGGGAATTGTGCCAAGCCTGATGAACTACATGAAATAGTCAAGGCTGGAGCTATGGGACTGAAGCTGCATGAGGATTGGGGAACTACACCGGCCGCAATAGACAACTGTTTGACTGTTGCAGAACAATATGATATCCAGGCACAACTTTCTGATATGTTTTCACTTATTTACTTTTGTAATTTTGGTTTACTTTTGGTTAACATACATACTGACACCTTAAATGAATCTGGATTTGTGGAACATACAATTGCTGCATTTAAAGGAAGAACTATTCATACTTACCACAGTGAAGGTGCAGGTGGTGGCCATGCTCCAGATATCATCAAAGTATGTGGTGTGAAGAATGTCCTACCCTCATCAACAAATCCTACACGCCCTTTTACATCAAATACCATAGATGAGCATCTTGACATGTTGATGGTCTGTCATCATCTTGATAGGAATATTCCAGAAGATGTTGCTTTTGCAGAATCAAGGATAAGAGCTGAAACAATTGCTGCTGAAGATATTTTGCATGATATGGGTGCAATTAGCATTATATCTTCTGATTCACAGGCTATGGGTAGAATTGGAGAGGTGATAAGCAGAACTTGGCAAACTGCCGATAAGATGAAGTCACAAAGAGGACTCCTGCAGGCTGGTGATTCAGACAATGACAACTTTCGAATCAAACGTTATGTTGCAAAGTACACTATAAATCCGGCTATAGTGAATGGTTTGTCGCGATATATTGGTTCAGTTGAGGTGGGAAAGTTAGCTGATCTTGTATTATGGAAACCTTCCTTTTTTGGAGCAAAACCAGAAATGGTGATAAAAGGTGGCGGGATTGCATGGGCTAACATGGGTGATGCAAACGCTAGCATCCCAACACCTGAACCGGTGATTATGAGACCTATGTTCGGTGCATTTGGCAAGGCTAGTAGTGCACACTCTATTGCTTTTGCAGCTTTGGACAATGGTGTAAAAGCTTCTTATGGACTTGACAAGAGGGTGGAAGCCGTGGACAATGTGAGGAAGCTCACCAAACTAGATATGAAATTGAATGATGCCCTTCCAGAAATAACTGTGGATCCAGAGACATACACAGTCACTGCAGATGGAGAGGTTCTAACCTGCACTGCTGCTTCTACTGTTCCTCTTTCCCGAAATTACTTCCTCTTCTAA | 2565 | 0.4136 | MKLCPREIEKLELHNAGYLAQKRLARGLKLNYTEAVALIATQIVEFVRNGDKSVAELMSIGRELLGRRQVLSAVPHLLETVQVEATFCDGTKLITVHDPIACENGNLELALFGSFLPVPSLDIFMENKEDGIIPGELKSEDGSLILNPGRVAVSLKVVNNGDRPVQVGSHYHFIEVNPYLIFDRRKAFGKRLNIASGTTTRFEPGESKSVILVSIGGNKVIRGGNNIVDGPVNDSSCIAAMEAVRTRGFGHLDEENAREGITGEDYSLTKLIPREEYANKYGPTIGDKIRLGDTNLFVEIEKDFAVYGDECVFGGGKVIRDGMGQSCGHPPDCSLDTVITNAVIIDYTGIFKADIGIKNGLISSIGKAGNPDIMDGVSVNMIIGANTEVIAGEGLIVTAGAIDCHVHFICPQLVYDAISSGITTLIGGGTGPADGTRATTCTPAPIQMQLMLQSTDDLPLNFGFTGKGNCAKPDELHEIVKAGAMGLKLHEDWGTTPAAIDNCLTVAEQYDIQAQLSDMFSLIYFCNFGLLLVNIHTDTLNESGFVEHTIAAFKGRTIHTYHSEGAGGGHAPDIIKVCGVKNVLPSSTNPTRPFTSNTIDEHLDMLMVCHHLDRNIPEDVAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVISRTWQTADKMKSQRGLLQAGDSDNDNFRIKRYVAKYTINPAIVNGLSRYIGSVEVGKLADLVLWKPSFFGAKPEMVIKGGGIAWANMGDANASIPTPEPVIMRPMFGAFGKASSAHSIAFAALDNGVKASYGLDKRVEAVDNVRKLTKLDMKLNDALPEITVDPETYTVTADGEVLTCTAASTVPLSRNYFLF | 854 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car05g02034 | 854 | CDD | Urease_gamma | 5 | 100 | IPR002026 | GO:0016151|GO:0043419 | |
| Car05g02034 | 854 | CDD | Urease_alpha | 272 | 853 | IPR005848 | GO:0006807|GO:0009039|GO:0016151 | |
| Car05g02034 | 854 | Pfam | Amidohydrolase family | 532 | 740 | IPR006680 | GO:0016787 | |
| Car05g02034 | 854 | Pfam | Amidohydrolase family | 396 | 515 | IPR006680 | GO:0016787 | |
| Car05g02034 | 854 | ProSitePatterns | Urease active site. | 607 | 623 | IPR017950 | GO:0009039 | |
| Car05g02034 | 854 | TIGRFAM | urease_gam: urease, gamma subunit | 1 | 102 | IPR002026 | GO:0016151|GO:0043419 | |
| Car05g02034 | 854 | Gene3D | - | 4 | 124 | IPR036463 | GO:0016151|GO:0043419 | |
| Car05g02034 | 854 | SUPERFAMILY | Urease, gamma-subunit | 1 | 104 | IPR036463 | GO:0016151|GO:0043419 | |
| Car05g02034 | 854 | Pfam | Urease beta subunit | 134 | 230 | IPR002019 | GO:0035550|GO:0043419 | |
| Car05g02034 | 854 | TIGRFAM | urease_beta: urease, beta subunit | 132 | 233 | IPR002019 | GO:0035550|GO:0043419 | |
| Car05g02034 | 854 | Pfam | Urease, gamma subunit | 1 | 100 | IPR002026 | GO:0016151|GO:0043419 | |
| Car05g02034 | 854 | Gene3D | - | 400 | 835 | - | - | |
| Car05g02034 | 854 | SUPERFAMILY | Urease, beta-subunit | 132 | 261 | IPR036461 | - | |
| Car05g02034 | 854 | Hamap | Urease subunit beta [ureB]. | 132 | 232 | IPR002019 | GO:0035550|GO:0043419 | |
| Car05g02034 | 854 | Hamap | Urease subunit alpha [ureC]. | 270 | 854 | IPR005848 | GO:0006807|GO:0009039|GO:0016151 | |
| Car05g02034 | 854 | Gene3D | Urease, beta subunit | 152 | 269 | IPR036461 | - | |
| Car05g02034 | 854 | SUPERFAMILY | Composite domain of metallo-dependent hydrolases | 271 | 448 | IPR011059 | GO:0016810 | |
| Car05g02034 | 854 | PIRSF | Urease | 1 | 854 | IPR008221 | GO:0006807|GO:0009039|GO:0016151 | |
| Car05g02034 | 854 | ProSiteProfiles | Urease domain profile. | 400 | 854 | IPR017951 | GO:0006807|GO:0009039|GO:0016151 | |
| Car05g02034 | 854 | Gene3D | Urease, subunit C, domain 1 | 270 | 770 | IPR011059 | GO:0016810 | |
| Car05g02034 | 854 | ProSitePatterns | Urease nickel ligands signature. | 398 | 411 | IPR029754 | GO:0016151 | |
| Car05g02034 | 854 | PANTHER | UREASE | 1 | 854 | - | - | |
| Car05g02034 | 854 | SUPERFAMILY | Metallo-dependent hydrolases | 400 | 854 | IPR032466 | - | |
| Car05g02034 | 854 | Pfam | Urease alpha-subunit, N-terminal domain | 272 | 390 | IPR011612 | - | |
| Car05g02034 | 854 | PRINTS | Urea amidohydrolase (urease) protein signature | 585 | 602 | IPR005848 | GO:0006807|GO:0009039|GO:0016151 | |
| Car05g02034 | 854 | PRINTS | Urea amidohydrolase (urease) protein signature | 691 | 706 | IPR005848 | GO:0006807|GO:0009039|GO:0016151 | |
| Car05g02034 | 854 | PRINTS | Urea amidohydrolase (urease) protein signature | 624 | 640 | IPR005848 | GO:0006807|GO:0009039|GO:0016151 | |
| Car05g02034 | 854 | PRINTS | Urea amidohydrolase (urease) protein signature | 717 | 730 | IPR005848 | GO:0006807|GO:0009039|GO:0016151 | |
| Car05g02034 | 854 | Pfam | Urease subunit beta-alpha linker domain | 232 | 265 | IPR040881 | - | |
| Car05g02034 | 854 | SUPERFAMILY | Composite domain of metallo-dependent hydrolases | 699 | 769 | IPR011059 | GO:0016810 | |
| Car05g02034 | 854 | CDD | Urease_beta | 132 | 232 | IPR002019 | GO:0035550|GO:0043419 | |
| Car05g02034 | 854 | TIGRFAM | urease_alph: urease, alpha subunit | 272 | 854 | IPR005848 | GO:0006807|GO:0009039|GO:0016151 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car05g02034 | K01427 | - | gmx:547672 | 1434.85 |