Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02033 ATGATGGCGTTTGTGAATTCCAGTACAGCGTTGAAGAAACAGGTTTTTCCAATTGACTTCGAAACAGAGATGTCACAGCATCTAATAGACGCCGTTCATCACGGTGATAACGAAACTGCAATGGAATGTGTAGCGAATCGTTTGGTGGATGTTAACTTCATTGGAACGGTGTCGTTGAAGTCTAAAACGACGGAGATCGTGCTTCAAGATGAGTCACCTCACCGAGTTAACTCGGTGTATGAGGAGTTTAAAACTGAGGTTACTGCTCTGTTTTTGGCTGCACATTCTGGAAATTTGATGCTACTTCGTAAGTTACTGAATGTGGGAGCTAATGTAAATCTGAGATTGTTCCGAGGCTATGCTACAACAGCAGCAGTGAGAGAAGGGCACCTGAAAGTGTTGGAGGTCCTTATCAATGGTGGGGCGTCACAACTTGCATGTGAGGAGGCTTTACTTGAAGCAAGCTACGTCGGACAAGCCAGATTTGCTGAGTTACTCATGCAGTCCAACATGATCCGTCCTCGTGTTGCAATTCATGCCCTTGTCTCTGCTTGTTGTAGAGGCTTCATTGAGGTTGTTGATGTACTCATCAAGCATGGAGTTGATGCCAATGCAATAGATAGGACTCTGCTTCAATCTTCAAAGCCATTTCTTCACGCTAATGTTGATTGCAATGCATTATTTGCTGCTGTGGTCAGCAGACAAATTAATGTTGTTAGATTGTTGTTGCAGGTTGGTGTAAAACTTGATATCAATGTTAAATTAGGGGCTTGGTCTTGGGATACAGATACAGGAGAAGAATTTCGTGTAGGTGTTGGACTAGGTGAAGCTTATCCAATCACATGGTGTGCTGTGGAGTATTTTGAATCTACTGGTTCTATACTTCATATGTTACTCTTTCATCTCCGACCTAATAGTTTTCACATTGGAAGGACTCTCTTACACCATGCCATAATATGTAACAATGAAAGAGCAGTGAACATACTTCTAAATAATGAAGTGGATACAGAACTAGTAGTGAAAACTACTGAAGAAACAAATATACACCCTATTCACATCGCATCCCGACTTGGATCATACAACATTCTTCAGTGTTTGATTAATAATGGTAGGTGTAACTTGGACTCTCGAACAAAATCTGGTGATACAGCATTGATGATTTGTACTAGGTATAAACATGAGAAATGTCTTAGAGTGTTGGTATCAGAAGGTGCTGATTTGGGGTTAGTGAATTCAATTGGTCATTGTGCAACTTCAATAGCAAATTCTATTCAGTGGAATGAAGTTTATCAGAAAACAATTTTGGATATAATTAGATCAGGAAAAAGTGTTAAATCAAGCAATGGTTCTAGATTTTCATCTTTGTTATTTGTCACACGTGCAAATGACATAGAGGCTTTGAAAAAACTCACTGAAAAGAAGAACATAAATATAAATGAACAAAATGCTAATGGATTATCAGCTGCAATGATAGCTTCTGCAGGGGGTAATGTGGAAGCTTTCAAGTTGCTTCTTCATGCTGGAGCTGATGTGATTAATCTTAAAAACAAATATGGTTTAACAGCTCTTAATTTCATTGACATGAACCAAAATAGTGAAATTTTTCGTAAGGTGATGTTTGAATATTATGCAGTTAAAAAGGGTTATTGCAATTTTAGTTCAATTGATGTGAATCCTCTTCACCGTGCAGCTTGTTATGGTGACATACACATTGTTGAAAAGTTATTAAAAGAAGGGTATGATGTGAATGGTTTTGATGAACATGGATACACACCGTTGATGTTAGCAGCAAGAAAAAACTGTGGAGAAATGTGTAAGCTTTTGATATCTTATGGAGCAAAATGTGAAATTGAAAATGAGAGACACGAAACAGCTCTTTTACTAGCAAGAGAAAACGTGAAAGGAAATTATGCAGAACGTGTGATAACAGATGAGGTAGCTAGAAGAGTTGTGTTGTGTGGTGCAAGTGTGAAGAAACATACAAAGTGTGGTAAAGGATCATTTCATACTAAGAAACTTGTAATGGTTGGTGCTGCTGGAATTTTACGTTGGGGGAAATCAAATAAGAGAAATATTGTCTGTAAAGTGGCTGAGGTTGGACCAAGTGAAAAATTTCGATGGAACCGTAGGAAGAAGTTTGATGTTGATGAGGCTGGAATGTTTCATGTTGTTTCCTCTAAAAATAAGGAGGTGCATTTTGTTTGTGAAGGTGGGGTTGAAATGGCTAAATTGTGGGTTAGGGGGATTAGATTAGTTACAAGTGAAGCCATTTTTGGATCTAGAGCTAATACAAGCTGA 2298 0.3838 MMAFVNSSTALKKQVFPIDFETEMSQHLIDAVHHGDNETAMECVANRLVDVNFIGTVSLKSKTTEIVLQDESPHRVNSVYEEFKTEVTALFLAAHSGNLMLLRKLLNVGANVNLRLFRGYATTAAVREGHLKVLEVLINGGASQLACEEALLEASYVGQARFAELLMQSNMIRPRVAIHALVSACCRGFIEVVDVLIKHGVDANAIDRTLLQSSKPFLHANVDCNALFAAVVSRQINVVRLLLQVGVKLDINVKLGAWSWDTDTGEEFRVGVGLGEAYPITWCAVEYFESTGSILHMLLFHLRPNSFHIGRTLLHHAIICNNERAVNILLNNEVDTELVVKTTEETNIHPIHIASRLGSYNILQCLINNGRCNLDSRTKSGDTALMICTRYKHEKCLRVLVSEGADLGLVNSIGHCATSIANSIQWNEVYQKTILDIIRSGKSVKSSNGSRFSSLLFVTRANDIEALKKLTEKKNININEQNANGLSAAMIASAGGNVEAFKLLLHAGADVINLKNKYGLTALNFIDMNQNSEIFRKVMFEYYAVKKGYCNFSSIDVNPLHRAACYGDIHIVEKLLKEGYDVNGFDEHGYTPLMLAARKNCGEMCKLLISYGAKCEIENERHETALLLARENVKGNYAERVITDEVARRVVLCGASVKKHTKCGKGSFHTKKLVMVGAAGILRWGKSNKRNIVCKVAEVGPSEKFRWNRRKKFDVDEAGMFHVVSSKNKEVHFVCEGGVEMAKLWVRGIRLVTSEAIFGSRANTS 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02033 765 Gene3D - 17 175 IPR036770 -
Car05g02033 765 ProSiteProfiles Ankyrin repeat profile. 588 620 IPR002110 GO:0005515
Car05g02033 765 ProSiteProfiles Ankyrin repeat region circular profile. 555 583 - -
Car05g02033 765 ProSiteProfiles Ankyrin repeat region circular profile. 85 115 - -
Car05g02033 765 PANTHER ANKYRIN DOMAIN PROTEIN 9 759 - -
Car05g02033 765 Gene3D - 435 552 IPR036770 -
Car05g02033 765 Pfam Ankyrin repeats (many copies) 461 505 IPR002110 GO:0005515
Car05g02033 765 ProSiteProfiles Ankyrin repeat profile. 85 117 IPR002110 GO:0005515
Car05g02033 765 Pfam Ankyrin repeats (3 copies) 347 409 IPR002110 GO:0005515
Car05g02033 765 Pfam Ankyrin repeats (3 copies) 553 618 IPR002110 GO:0005515
Car05g02033 765 SUPERFAMILY Ankyrin repeat 28 251 IPR036770 -
Car05g02033 765 SMART ANK_2a 588 617 IPR002110 GO:0005515
Car05g02033 765 SMART ANK_2a 555 584 IPR002110 GO:0005515
Car05g02033 765 SMART ANK_2a 117 146 IPR002110 GO:0005515
Car05g02033 765 SMART ANK_2a 346 376 IPR002110 GO:0005515
Car05g02033 765 SMART ANK_2a 309 338 IPR002110 GO:0005515
Car05g02033 765 SMART ANK_2a 484 514 IPR002110 GO:0005515
Car05g02033 765 SMART ANK_2a 222 253 IPR002110 GO:0005515
Car05g02033 765 SMART ANK_2a 450 480 IPR002110 GO:0005515
Car05g02033 765 SMART ANK_2a 380 409 IPR002110 GO:0005515
Car05g02033 765 SMART ANK_2a 85 114 IPR002110 GO:0005515
Car05g02033 765 SMART ANK_2a 176 205 IPR002110 GO:0005515
Car05g02033 765 Gene3D - 176 261 IPR036770 -
Car05g02033 765 Gene3D - 553 664 IPR036770 -
Car05g02033 765 PANTHER ANKYRIN REPEAT-CONTAINING 9 759 - -
Car05g02033 765 ProSiteProfiles Ankyrin repeat region circular profile. 588 620 - -
Car05g02033 765 ProSiteProfiles Ankyrin repeat profile. 555 587 IPR002110 GO:0005515
Car05g02033 765 Coils Coil 464 484 - -
Car05g02033 765 ProSiteProfiles Ankyrin repeat profile. 380 412 IPR002110 GO:0005515
Car05g02033 765 ProSiteProfiles Ankyrin repeat profile. 484 516 IPR002110 GO:0005515
Car05g02033 765 SUPERFAMILY Ankyrin repeat 310 643 IPR036770 -
Car05g02033 765 Gene3D - 302 434 IPR036770 -
Car05g02033 765 ProSiteProfiles Ankyrin repeat region circular profile. 484 511 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02033 444 647 Miscellaneous Gene Families AT1G07710 25.592 9.58e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02033 - - mtr:MTR_3g085630 1251.5