Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02018 ATGCAAACAAAGAAAAAGGCCTCCAGGCGAAATGCTAGCCGAGAGTGCAATCCTCCCAGGGTTTCAAGAACACAGAGGAACGCCTCTGAAAATGGCCAAGTGGTTGAAAAGAAAGTGGCCGATTTAATTACATCTTCTGCTAGAAAGATTAAATCTTCTTGTGCTCTTGAGGATAAAGCTAGAGAGCCAACACCCCTAACTCTTCTGAATGATGAATTCAACTTTGTGGAGAATGGGGTTTCCAATATTTATCCGGGAAATGAAGCAGTTGATGGTGCTTCAGTAGATTTTATGGGTTGTAACAAGCAAGCTGTACCTCTGGAGACTGGAACTATATTTTCTCCTGCGTTTCACTTATCCAAAGGTGCTGGTGGAAAAGTTGTTGACAGAGCTGATTTTGTAAATTTTTTTCGGCATGACGATCAAAAAAGAAGTTCTCTAGACCAAGAAGTAATACAGTTACCACAGGAGGATGCAGGAGATGGCCATGTTAGCCAAGATTCTGACTCTGCCATGGAAGTAGACATAAACAATTCATCAAATATGATTTCTTTAAGCACAAAAACTGTGAATGATTGCAATTCTGATTTTGATGGAAATAGTTTTTCCGAGGAAGTTTCTACCATATATCATGCCATGAATAACTCAAAGCTGGAATGCGTTGATGAGCATGGTCAGGATTCTATATCTACTGATATGTGCCCAGAGGACGATGAAATTGAGGATTTTGATGATTTTGACCCTTACTTATTCATAAAGACCTTACCAGACTTGTCAAAAGTTGTTCCTACTTTTAGACAGATGTTGCTACCGAAGCAGACTCGGAGTTGTCCTCCAACTACTCTTGTCCTGGACTTGGACGAAACTTTGGTGCATTCTACCCTAGAGCCTTGTGAGGATGTAGACTTTACTTTCACCGTGGATTTTAATCAAAAGGAGCATAGTGTCTATGTACGCTGCCGTCCCCACCTAAAAGATTTCCTCGAGAGAGTTTCTGGTCTTTTTGAGATTATTATATTTACAGCCAGTCAAAGTATTTATGCTGAACAACTACTAAATGTGCTTGATCCAAAGCGGAAAATATTTCGCCATCGTGTTTTCCGTGAATCCTGTGTTTATGTGGAGGGAAATTACCTCAAAGATTTAACTGTGCTCGGCCGTGATTTAGCACATGTTATAATAATTGACAACTCCCCACAGGCATTTGGGTTCCAAGTAGACAATGGAATACCAATTGAGAGTTGGTTTGATGATCGTTCAGATCAAGAATTGCTGTTAATACTTCCTTTCTTGGAGAGTTTGGTAGCAGTTGATGATGTCCGGCCACTAATTGCAAAAAGGTTCAACCTCCGGGAGAAAATTGCTGCAGCTGCACATCCTCTCAATACAAATAGAAGGGATTTTTTGTCAGAATAA 1416 0.4032 MQTKKKASRRNASRECNPPRVSRTQRNASENGQVVEKKVADLITSSARKIKSSCALEDKAREPTPLTLLNDEFNFVENGVSNIYPGNEAVDGASVDFMGCNKQAVPLETGTIFSPAFHLSKGAGGKVVDRADFVNFFRHDDQKRSSLDQEVIQLPQEDAGDGHVSQDSDSAMEVDINNSSNMISLSTKTVNDCNSDFDGNSFSEEVSTIYHAMNNSKLECVDEHGQDSISTDMCPEDDEIEDFDDFDPYLFIKTLPDLSKVVPTFRQMLLPKQTRSCPPTTLVLDLDETLVHSTLEPCEDVDFTFTVDFNQKEHSVYVRCRPHLKDFLERVSGLFEIIIFTASQSIYAEQLLNVLDPKRKIFRHRVFRESCVYVEGNYLKDLTVLGRDLAHVIIIDNSPQAFGFQVDNGIPIESWFDDRSDQELLLILPFLESLVAVDDVRPLIAKRFNLREKIAAAAHPLNTNRRDFLSE 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02018 471 Gene3D - 265 448 IPR023214 -
Car05g02018 471 PANTHER INTERACTING FACTOR, PUTATIVE, EXPRESSED-RELATED 1 458 - -
Car05g02018 471 SMART forpap2 278 422 IPR004274 -
Car05g02018 471 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 1 458 - -
Car05g02018 471 TIGRFAM HIF-SF_euk: dullard-like phosphatase domain 280 443 IPR011948 GO:0016791
Car05g02018 471 Pfam NLI interacting factor-like phosphatase 281 441 IPR004274 -
Car05g02018 471 ProSiteProfiles FCP1 homology domain profile. 275 434 IPR004274 -
Car05g02018 471 MobiDBLite consensus disorder prediction 1 33 - -
Car05g02018 471 CDD HAD_FCP1-like 281 412 - -
Car05g02018 471 SUPERFAMILY HAD-like 269 445 IPR036412 -
Car05g02018 471 MobiDBLite consensus disorder prediction 15 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02018 Car-Chr5 65474103 65479722 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02018 K17616 K12778 gmx:100798665 704.516