Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02010 ATGAAGTTAACGTTTGTGTGTGTTTTGGGTCTGATTATGATCATAGGTGGTTCTGAAGGAGCCGAAGATTTGGCTCAGAAATGTGGACAAGTGGTTCAAAAGGTGATTCCATGTTTGGATTTTGCAACTGGGAAAGCATTAACACCAAAAAAGGAATGCTGTGATGCAGCAAATAGTATAAAGGAAACGGATCCAGAGTGTTTGTGTTATATAATTCAACAGACACATAAGGGTAGCCCTGAAAGTAAGAGTTTGGGTATTCAAGAGGATAAACTTCTTCAACTACCTACTGTTTGTAAAGTCAAAAATGCCAATCTCACTGATTGTCCTAAACTTCTGGGACTATCTCCAAGTTCCCCTGACGCTGCAATATTTAAAAATGCATCAAAGTTAAGTCCTCCTTCAACTCCATCTGCATCTGCTGATCAAACTTCAACCCCACCCACCCCAAGTGATTCATATATGGTTAGACCTCTTATGATGACAGAAGTGATTGTGATGACTTTGGCTATTCTTGCTGTTGCTGTACCTACCGGATTTATCAGCATTTATACATGA 558 0.3961 MKLTFVCVLGLIMIIGGSEGAEDLAQKCGQVVQKVIPCLDFATGKALTPKKECCDAANSIKETDPECLCYIIQQTHKGSPESKSLGIQEDKLLQLPTVCKVKNANLTDCPKLLGLSPSSPDAAIFKNASKLSPPSTPSASADQTSTPPTPSDSYMVRPLMMTEVIVMTLAILAVAVPTGFISIYT 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02010 185 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Car05g02010 185 PRINTS Plant phospholipid transfer protein signature 48 62 IPR000528 GO:0006869|GO:0008289
Car05g02010 185 PRINTS Plant phospholipid transfer protein signature 86 103 IPR000528 GO:0006869|GO:0008289
Car05g02010 185 MobiDBLite consensus disorder prediction 126 154 - -
Car05g02010 185 Pfam Probable lipid transfer 22 109 IPR016140 -
Car05g02010 185 MobiDBLite consensus disorder prediction 126 152 - -
Car05g02010 185 CDD AAI_LTSS 37 101 - -
Car05g02010 185 SMART aai_6 28 109 IPR016140 -
Car05g02010 185 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 1 9 177 - -
Car05g02010 185 Gene3D - 25 107 IPR036312 -
Car05g02010 185 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 9 177 IPR043325 -
Car05g02010 185 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 109 IPR036312 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02010 27 169 Acyl Lipid Metabolism Gene Families AT1G27950 50.327 7.09e-47 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02010 - - adu:107482371 234.958