Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01998 ATGtctgtctcttttgtactctccacctctttctctttctctccctcttcttccttttcattctcCAAACCAAAACTCCCTTTTCAATGCTCCTCCTCCTCCTCCAACTTCCCATCTTCCAATATAAATAAACCACTCTCTTCTCTCTCTCCAACCTTCAACTTCACTTTCGTTGCTCATTCTTCATCGAGGGACAAAGACTCGTCCTTCCTAGGAGAGGACTCCGCCTCGTTTGATTTGGGGGAACAGAAAATATCTTCATGGATTTCTTTCACTGCTATTTTGGGACTTGTTCTCTTCCTTCTAAACGTGCTTTGGATTAATAATTCAACTGGCTTTGCCAAACCTTTCGTCGATGCCGTTTCACACCTTTCCGATTCTCACGAGGTGGTAATGTTGACCCTAATACTCATATTTGCCATTTTCCACAGTGGAATGGCTAGCTTTCGGAACACTGGCGAAAAACTGATTGGTGAAAGAGCTTTTCGTGTTCTTTTTGCAGGGATTTCACTACCTTTGGCTGTCACTACTATTGTCAGTTACTACTTGCCTTTCCCTCTCAATTACTTGTCTTCTTCATGCTTTATTATTTTCAAACACAAGTTCATTCCATCTATCTACGGCATCATGGTGCAGGTGTATTTTATTAACCACAGATATGATGGACTTCAACTCTGGCACCTCAACACTACTCCTGGGATTCATCAACTTGTGTGGCTCTCCAATTTCGTCTCTTTCTTTTTCCTATATCCTTCAACCTTTAATCTTTTAGAGATTGCAGCAGTTCACAAGCCTAAAATACATCTATGGGAAACTGGCATCATCAGGATAACCAGGCATCCGCAGATGGTTGGGCAAGTAATCTGGTGTCTTGCTCATACGGTTTGGATTGGAAATTCTGTGGCTGTTGCAGCCTCAATTGGCTTAATTGCACATCATCTATTTGGCGCCTGGAATGGAGACAGGCGATTGGCTATAAAACATGGAGAAGATTTTGAGATAATTAAGCGTCGAACAAGTATTGTCCCTTTTGCAGCAATTCTTGATGGCCGTCAAAGATTACCTAAAGATTTCTACAAGGAGTTTATTCGATTACCATACTTAACAATTACTGCATTAACACTTGGAGCTTACTTTGCACACCCACTTATGCAGGCTGCTAGTTTCAACCTCCATTGTGTGCATCAATAG 1191 0.3946 MSVSFVLSTSFSFSPSSSFSFSKPKLPFQCSSSSSNFPSSNINKPLSSLSPTFNFTFVAHSSSRDKDSSFLGEDSASFDLGEQKISSWISFTAILGLVLFLLNVLWINNSTGFAKPFVDAVSHLSDSHEVVMLTLILIFAIFHSGMASFRNTGEKLIGERAFRVLFAGISLPLAVTTIVSYYLPFPLNYLSSSCFIIFKHKFIPSIYGIMVQVYFINHRYDGLQLWHLNTTPGIHQLVWLSNFVSFFFLYPSTFNLLEIAAVHKPKIHLWETGIIRITRHPQMVGQVIWCLAHTVWIGNSVAVAASIGLIAHHLFGAWNGDRRLAIKHGEDFEIIKRRTSIVPFAAILDGRQRLPKDFYKEFIRLPYLTITALTLGAYFAHPLMQAASFNLHCVHQ 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01998 396 Gene3D - 125 344 - -
Car05g01998 396 Pfam NnrU protein 131 181 IPR009915 -
Car05g01998 396 Pfam NnrU protein 210 384 IPR009915 -
Car05g01998 396 PANTHER 15-CIS-ZETA-CAROTENE ISOMERASE, CHLOROPLASTIC 210 392 - -
Car05g01998 396 PANTHER 15-CIS-ZETA-CAROTENE ISOMERASE, CHLOROPLASTIC 45 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01998 Car-Chr5 65292583 65294447 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01998 K15744 - gmx:100793910 498.434