Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01994 ATGGCCATCTTCTCTACAACGTTAGGTTCCTTCGCTTCCATATCCTTCCTCTCACATTCACAACCCGACTCTTTTTCTTCTTCTACCGTCAATCCATTCACTTTCCCCAAATTCCCCCACAAGTTCGCACCTTCCCAATGCCATCATCATCATCGTCATAAAATCTTCGTCTCTGgtagtagtaatagtagtagtGATACCCACATTGATGAATTCGCCAGTGGTCTTCTTCAACGCCCTTCTGCTCCTGACTCATACGAAGCCCTTCGCCAAGCTCGGAGATCGTCAGATTGGAAGGCTGCAAACGCATATAGAGATAGCGGACTCATTTACAATGGTAGGGTTGAGGGTTCTAATGCTGGAGGCTTGCTGCTTCGGTTTTACTCTATCATGGGCTTTCTCCCATACCCACAGTTGAGCCCATTGCATGCTTGTAAAGCACCGGAGAAAACTATCCAAGAAATTGCAAGAGACTTGCTCGGTTCCATTTTACCAGTCAAGGTAATAATAGTAGATGAAGATAAAAGGAAGTTGGTCTTATCTGAAAAAGAAGCTTCCTGGTTTAAACATTCAAAACATGTCAACATAGGGGACATTTTTGAAGCAATAGTTGGTTCTGTTGAGGACTATGGTGCTTTTGTTCATCTGCGTTTCCCTAATGGTCTTTATCATCTTACTGGACTGATACATATCTCAGAAGTGTCATGGGATCTAGTTCAAGATGTAAGAGACTTCTTAACAGAAGGCGATAAAGTGAGGGTCAAAGTTATAAGTATTGATAGTGTGAAATCGAGGATTACACTGTCAATTAAACAGCTAGAAGAAGATCCACTTCTAGAAACTCTGGATAAAGTAATACCTCAGGATGGCTCAGCTGCTCTGGATATTTTCAGCGGTAGTAATAGCAGTGGCATCGAGCCCCTTCCAGGGCTGGAGACAATTCTTGAAGAGCTACTGCAGGAATATGGCATATATGAAGCAAGAATCAGCCGTCAGGGGTTTGAAAAACGAGTGGTCTCACAAGACTTGCAGCTTTGGCTTTCTAACGCACCTCCCATGGACCAAAGGTTTACTCTCCTTGCTCGGGCTGGAAGACAGGTGCAAGAGATACATTTGAAAACATCCCTTGATCAGGAAGGTATAAAAAAGGCAATACAACGAGTATTGGAGCGTGTTCCCTGA 1182 0.4298 MAIFSTTLGSFASISFLSHSQPDSFSSSTVNPFTFPKFPHKFAPSQCHHHHRHKIFVSGSSNSSSDTHIDEFASGLLQRPSAPDSYEALRQARRSSDWKAANAYRDSGLIYNGRVEGSNAGGLLLRFYSIMGFLPYPQLSPLHACKAPEKTIQEIARDLLGSILPVKVIIVDEDKRKLVLSEKEASWFKHSKHVNIGDIFEAIVGSVEDYGAFVHLRFPNGLYHLTGLIHISEVSWDLVQDVRDFLTEGDKVRVKVISIDSVKSRITLSIKQLEEDPLLETLDKVIPQDGSAALDIFSGSNSSGIEPLPGLETILEELLQEYGIYEARISRQGFEKRVVSQDLQLWLSNAPPMDQRFTLLARAGRQVQEIHLKTSLDQEGIKKAIQRVLERVP 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01994 393 Pfam S1 RNA binding domain 195 271 IPR003029 GO:0003676
Car05g01994 393 Gene3D - 190 273 IPR012340 -
Car05g01994 393 SUPERFAMILY Nucleic acid-binding proteins 108 183 IPR012340 -
Car05g01994 393 SUPERFAMILY Nucleic acid-binding proteins 195 284 IPR012340 -
Car05g01994 393 ProSiteProfiles S1 domain profile. 108 183 IPR003029 GO:0003676
Car05g01994 393 SMART S1_6 195 271 IPR022967 -
Car05g01994 393 SMART S1_6 106 183 IPR022967 -
Car05g01994 393 PANTHER OS03G0844900 PROTEIN 11 393 - -
Car05g01994 393 ProSiteProfiles S1 domain profile. 197 271 IPR003029 GO:0003676
Car05g01994 393 Gene3D - 98 189 IPR012340 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01994 - - gmx:100798303 531.561