Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01989 ATGTCTGAAATCGCGAGCACAGATCCCGAGGGAGTAGATGGAGTTCGCATGACATGGAACGTTTGGCCACGAAGCAAAGTAGAAGCAAGCAAGTGCGTCATCCCTCTGGCCGTCACTTTATACGTGATCCGTCCTCATCCCGACATCCCTCGTCTCCCTTACGCCCCTCTCCGTTGCAAAACCTGCAGCGCTGCCCTTAACCCTTTCGCTCGTGTCGATTTCACCGCCAAGATCTGGATCTGTCCTTTCTGTTATCAACGTAATCATTTCCCTCCTCATTATAACGCTATCTCTGAAACACATCTACCTGGTGAACTTTACCCTCAATACACCACCGTTGAATACGCTATTCCTCATTCCGATCCTAATCCTCCTCCTTCCCCTGTTTTTCTCTTTCTCCTTGATACTTGTATCATCGATGAAGAGATCGAATTTCTCAAATCTGCTCTTAAACGTGCTATCGGCCTTTTACCTGATAATGCCCTTGTTGGTTTTTTATCCTTTGGTACTCAGGTTCAGGTTCATGAATTGGGATTCTCCGATATGTCTAAGGTTTATGTCTTTCGTGGTTCCAAAGAGATTTCTAAAGATCAGATTTTGGAACAGTTAGGTCTTGCTTCTTCTGCTTCTGCTAGGAGACCTATGAAGGGTGCTCCTTTCCCTAATTCTGGTGTGTCGCGCTTTTTGTTGCCTGCATCTGAGGGTGAATACACTCTTAATTCGCTGTTAGATGAATTGCAGCGCGATCAGTGGCCTGTTCCTCCCGGCAAACGACATGCTCGCTGTACCGGAGTTGCATTGAGTGTTGCAGCTGGATTGCTTAGTGCTTGTATTCCCGGAACTGGTGCTAGAATCATAGCTTTGGTCGGGGGACCATGCACGGAAGGACCTGGCACGATTGTGTCAAAAGATCTCTCTGATCCGGTGCGTTCTCATAAAGATCTTGATAAAGATGCAGCGCCCTACTTTAAGAAAGCAGTCAAATTTTATGAGGGTCTTGCAAAACAGCTGGTTAGCCAGGGTCATGTTTTAGATATTTTTGCATCAGCACTTGATCAGGTTGGAGTTGCAGAAATGAAAGTTGCAGTTGAAAGAACTGGTGGCCTTGTTGTCCTGTCTGAAAGTTTTGGTCATTCAGTCTTCAAGGACTCTTTTAAGCGTGTTTTCGAGGATGGGGAGCAATCTCTTGGTCTTTGTTTCAATGGAACCCTTGAGATTAATTGCTCAAAGGAAATCAAAATTCAGGGAATTGTTGGACCTTGCACATCGATGGAGAAGAAAGGGCCTTCTGTTGCTGATACTGTCATAGGAGAGGGGAACACAACAATATGGAAAATGTGTGGCCTTGACAAGAGTACGTGCTTGACTGTGTTGTTTGATCTTTCATCAAGTGATCGTGCAAATACTCCAGGTGCTGTCAACCCACAATTGTACCTGCAGTTTCTTACAAGTTACCAGAGCCCAGATGGTCAATTAGTGCTTCGTGTGACAACAGTAACTAGAAGATGGGTAGATAGTTCTGTTAGCTCTGAGGAATTGGTTCAAGGATTTGACCAAGAAACTGCTGCAGTGGTAATGGCTAGATTTGCTTCTCTGAAAATGGAGACAGAGGAAACATTTGATGCCACACGGTGGTTGGATAGGTTCCTCATTCGCCTCTGTTCTAAATTTGGGGACTACCGCAAAGACGATCCATCATCATTTACATTAAACCCATCATTTTCTCTTTTCCCCCAGTTTATGTTCAATCTGCGACGCTCACAGTTTGTACAGGTTTTTAACAACAGTCCAGATGAGACTGCATACTTCCGCATGTTGTTAAACCGGGAAAATATTAGTAATGCAGCTGTCATGATTCAGCCATCTCTAATATCATATTCATTTAATTCACTGCCTGCACCAGCATTGTTGGATGTCGCTTCCATTGCTGCAGACCGGATTCTGTTGCTAGATTCATATTTTAGTGTGGTTATTTTTCATGGGATGACAATAGCTCAATGGCGCAACTTGGGATACCAGAACCAACCAGAACACCAGGCCTTTGCGCAACTATTACGAGCTCCACAAGATGATGCCCAAGCGGTTATTAGAGATCGGTTCCCTGTTCCTAGATTGGTAGTGTGTGATCAACATGGTTCCCAGGCTAGATTTTTATTAGCAAAGCTGAATCCCTCAGCAACATATAATAATGCGCACGAGATGGCTGCTGGTTCTGATGTAATCTTTACTGATGATGTTAGTCTTCAAGTTTTCTTTGAGCATCTGCAAAGGCTGGCTGTCCAATCTTGA 2289 0.4447 MSEIASTDPEGVDGVRMTWNVWPRSKVEASKCVIPLAVTLYVIRPHPDIPRLPYAPLRCKTCSAALNPFARVDFTAKIWICPFCYQRNHFPPHYNAISETHLPGELYPQYTTVEYAIPHSDPNPPPSPVFLFLLDTCIIDEEIEFLKSALKRAIGLLPDNALVGFLSFGTQVQVHELGFSDMSKVYVFRGSKEISKDQILEQLGLASSASARRPMKGAPFPNSGVSRFLLPASEGEYTLNSLLDELQRDQWPVPPGKRHARCTGVALSVAAGLLSACIPGTGARIIALVGGPCTEGPGTIVSKDLSDPVRSHKDLDKDAAPYFKKAVKFYEGLAKQLVSQGHVLDIFASALDQVGVAEMKVAVERTGGLVVLSESFGHSVFKDSFKRVFEDGEQSLGLCFNGTLEINCSKEIKIQGIVGPCTSMEKKGPSVADTVIGEGNTTIWKMCGLDKSTCLTVLFDLSSSDRANTPGAVNPQLYLQFLTSYQSPDGQLVLRVTTVTRRWVDSSVSSEELVQGFDQETAAVVMARFASLKMETEETFDATRWLDRFLIRLCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFVQVFNNSPDETAYFRMLLNRENISNAAVMIQPSLISYSFNSLPAPALLDVASIAADRILLLDSYFSVVIFHGMTIAQWRNLGYQNQPEHQAFAQLLRAPQDDAQAVIRDRFPVPRLVVCDQHGSQARFLLAKLNPSATYNNAHEMAAGSDVIFTDDVSLQVFFEHLQRLAVQS 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01989 762 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 1 761 IPR037364 -
Car05g01989 762 SUPERFAMILY beta-sandwich domain of Sec23/24 8 517 - -
Car05g01989 762 Gene3D - 53 112 - -
Car05g01989 762 Pfam Sec23/Sec24 helical domain 518 614 IPR006900 GO:0006886|GO:0006888|GO:0030127
Car05g01989 762 Gene3D Sec23/Sec24 helical domain 515 759 - -
Car05g01989 762 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 1 761 - -
Car05g01989 762 Gene3D - 10 501 - -
Car05g01989 762 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 621 761 IPR036180 -
Car05g01989 762 Gene3D von Willebrand factor, type A domain 124 398 IPR036465 -
Car05g01989 762 SUPERFAMILY Helical domain of Sec23/24 518 620 IPR036175 GO:0006886|GO:0006888|GO:0030127
Car05g01989 762 Pfam Gelsolin repeat 630 718 IPR007123 -
Car05g01989 762 Pfam Sec23/Sec24 zinc finger 56 94 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Car05g01989 762 CDD Sec23_C 610 730 IPR037550 GO:0030127|GO:0090114
Car05g01989 762 Pfam Sec23/Sec24 beta-sandwich domain 400 504 IPR012990 -
Car05g01989 762 SUPERFAMILY vWA-like 128 390 IPR036465 -
Car05g01989 762 Pfam Sec23/Sec24 trunk domain 125 389 IPR006896 GO:0006886|GO:0006888|GO:0030127
Car05g01989 762 SUPERFAMILY Zn-finger domain of Sec23/24 47 119 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Car05g01989 762 Gene3D Severin 620 724 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01989 Car-Chr5 65220176 65227101 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01989 K14006 - gmx:100813940 1380.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01989 05 65220176 65227101 Car05g01989 05 65220176 65227101 ECH