Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01984 ATGAAAGTGTCTCAAGACAATGCTTATGAGATATTTTCTTGGCTACAAGCAAAGACTATTTGTAAATTCAAATCATGTTGCAAATCATTTTCCAAATTTTTAGAAGAAAGCGATTTTAAAACAAAGCAAGCTAATAATTTATTAAAGAAGGATGACACATGCTTCTTTATTCAACCTGGACAAATAGAGCAAAGGTACAAAAAAATAGTTGAGTTGCATACTTTACTTAAAGAAAAACAATCTTCAGGTATTCCTAACAATGTTCTAAAATTCCTATCAAAATCGGCTAGTGTCTTATCTTCTAGTAATGGCTTAATTCTTTGTTGCACCATAAGTGATCAACAAGATCCGATTGAGTTATTCATTTGTAATCCAATCACAAAGTCTCGGTCTTTCATTCCTACACCAAAATCACTTCAAGGAAACTATCCTTATGTTGATATTAATATCATGTTAGATTGTTCTAATGGTTCCTCATATGATTACAAAATCTTTCTATTTGAAAACACAATAGCATGGTCACCAACTTGTTATATATGCAAGGTTTACGATGGAAAAGAAGGCGTGTGGAAAACAATGGAAAATAATTTCTTTTCTGGTGGTCGAAATATGAAATTTGACATGTCTGTACTTCACAACGGAGTCATTTATTTTATCTCAGATTGTTCTCCTTACTTTGGTATATCGAGCCCTTTTTACATGCCTTATATCATGTCTTATAATTTAGAGAATGGAATATCAACAATCCTTAGATTGCCGGAGGAAGCAACAAAAGGTTGTAATGAGAATCACGTGTCATGTGACATGGGTATCTTTAAATGGGGTAAAGTTACAAATCCAAATCAATCCATTTGTTTGGTGAGATTGAGAGAATGTGTTTTCAATGTATGGTTTTTAAAAGATTATGAATCGAGTTTATGGGAAAGTGTCTTAGAAGTAAGAGTGAGAGCACTCGGATTAAAAGAAAAAGATCCTAATGTTAGAGTATTTATGGTTATGAATGGTGATCTTTTAATTTTTGCTACAAAAAATAAGGTTTATAGTTGTGGTTTGAGTAATGAAAGATTAATGGTGGTAGAAGAAATATGTGAGCATAGTTGTGGATATAGTCCACGCTTAATTTCTTACTCAAATACTCTTCGGTTGTGTGGGACTAATGCTGCAGCATTGCCTTGTTAG 1179 0.3257 MKVSQDNAYEIFSWLQAKTICKFKSCCKSFSKFLEESDFKTKQANNLLKKDDTCFFIQPGQIEQRYKKIVELHTLLKEKQSSGIPNNVLKFLSKSASVLSSSNGLILCCTISDQQDPIELFICNPITKSRSFIPTPKSLQGNYPYVDINIMLDCSNGSSYDYKIFLFENTIAWSPTCYICKVYDGKEGVWKTMENNFFSGGRNMKFDMSVLHNGVIYFISDCSPYFGISSPFYMPYIMSYNLENGISTILRLPEEATKGCNENHVSCDMGIFKWGKVTNPNQSICLVRLRECVFNVWFLKDYESSLWESVLEVRVRALGLKEKDPNVRVFMVMNGDLLIFATKNKVYSCGLSNERLMVVEEICEHSCGYSPRLISYSNTLRLCGTNAAALPC 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01984 392 TIGRFAM F_box_assoc_1: F-box protein interaction domain 102 343 IPR017451 -
Car05g01984 392 PANTHER PROTEIN, PUTATIVE-RELATED 38 389 - -
Car05g01984 392 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 38 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01984 Car-Chr5 65194642 65195820 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01984 - - mtr:MTR_1g016400 461.84