Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01980 ATGTCGCACAACCACAACTTCCTCATCGTCACATACCCTTTACAAGGTCATATTAACCCTGCTCTCCAATTCGCCAAGCGACTCGTCACTATGGGCGCACACGTCACCTTCACCACCACTATCTACTTACACCGTCGCCTTATCAACAAACCAACCATTCCCAACCTCTCCTTCGCCGCCTTCTCCGACGGCTACGACGACGGTTACAATTCCAACGCCATCGTCGACCTCTCTACCTACATGTTGGAGCTAAGTAGCCGCGGCTCAGAATTTCTCAGAAATATCATACTCTCCGCAAAACATGGAAATCACCCATTCACTTGTTTGGCTTACACGCTCCTCCTTCCTTGGGCTGCCAACGTAGCGCGTGAGCTTCAACTCCCATATGCGCTACTCTGGATTCAAGCTGCAACGGTTTTTGATATTTACTATTACTACTTGCACGAACACGGTGACTACATCACAAACAAATCAAAAGACGCCACGTGTAACATAGAATTACCGGGATTGTCATTCTCGCTTAAAAGCCGTGACCTTCCGTCTTTTTTACAGGCTTCAAACATTTACACTTTTATCCTTTCATCTATGAAAGAGCAATTTCGAATACTGGACGAAGAAACTAACCCGATAGTACTTGTGAACACCGTTGATGAATTTGAACTTGAATCAGTTAGAGCCATTGATGATAAGATTAAAATGATACCAATCGGACCGTTGATTCCATCTGCTTATTTGGACGGTAAAGATCTTACTGATACTTCGTTTGGTGGTGACGTCATCCGTGTAGACTCAGAGGATTACATTGAATGGCTGGATTCGAAAGATGAATCGTCTGTCGTTTATGTTTCATTTGGTTCTTTTTCTGTTTTGCCTAAGAAACAAATGGAGGAATTCGCGCGTGCGTTGTTGGATTCTGGATTGAATTTCTTATGGGTAATTAGAGAGAAAAAAGTAGACGAAAAAAAAGAGGATGATGAGTTGAGTTGTAAAGAGGAACTTGAAAAGAATGTTAACGGGAAGATAGTGAAATGGTGTTCGCAAGTGGAGGTTCTGTCGCATTCTTCAGTGGGATGTTTTGTGACACACTGCGGATGGAATTCGACGACGGAGAGTTTGGTATCGGGAGTTCCTATGGTGGCGTTTCCTCAGTGGACGGATCAAAGTACAAATGCGAAACTAATTGAAGATGTGTGGAAGTGTGGGGTGAGGATGGATAATAATCGTGACGAGGAAGGGATAGTGAAAGCTGATGAAATCAGGAGGTGTTTGGAATTGGTGATCGGAGGTGGAGAAAAAGGAGAGGAACTGAAAAGGAATGCTGAGAAATGGAAGAGTTTGGGTAGGGAGGCTGTGAAGGAAGGAGGGTCTTCAGATAAGAATCTTAAGAGTTTTCTTCATCATATTGGATCTATTTAG 1416 0.4357 MSHNHNFLIVTYPLQGHINPALQFAKRLVTMGAHVTFTTTIYLHRRLINKPTIPNLSFAAFSDGYDDGYNSNAIVDLSTYMLELSSRGSEFLRNIILSAKHGNHPFTCLAYTLLLPWAANVARELQLPYALLWIQAATVFDIYYYYLHEHGDYITNKSKDATCNIELPGLSFSLKSRDLPSFLQASNIYTFILSSMKEQFRILDEETNPIVLVNTVDEFELESVRAIDDKIKMIPIGPLIPSAYLDGKDLTDTSFGGDVIRVDSEDYIEWLDSKDESSVVYVSFGSFSVLPKKQMEEFARALLDSGLNFLWVIREKKVDEKKEDDELSCKEELEKNVNGKIVKWCSQVEVLSHSSVGCFVTHCGWNSTTESLVSGVPMVAFPQWTDQSTNAKLIEDVWKCGVRMDNNRDEEGIVKADEIRRCLELVIGGGEKGEELKRNAEKWKSLGREAVKEGGSSDKNLKSFLHHIGSI 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01980 471 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 468 - -
Car05g01980 471 PANTHER GLYCOSYLTRANSFERASE 4 468 - -
Car05g01980 471 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 4 468 - -
Car05g01980 471 ProSitePatterns UDP-glycosyltransferases signature. 344 387 IPR035595 -
Car05g01980 471 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 266 400 IPR002213 GO:0008194
Car05g01980 471 Gene3D Glycogen Phosphorylase B; 254 449 - -
Car05g01980 471 CDD GT1_Gtf-like 6 450 IPR002213 GO:0008194
Car05g01980 471 Gene3D Glycogen Phosphorylase B; 10 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01980 Car-Chr5 65159679 65161538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01980 6 465 Glycosyltransferase AT4G15550 47.490 1.30e-145 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01980 - - gmx:100800222 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01980 05 65159679 65161538 Car05g01980 05 65159679 65161538 ECH