Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01976 ATGTCGTTGGCTTGTAGCAGATCAAGTCTAGGCATGATGGCAATTGGAGCAATCAATGTGGTAAGGGGTTCAAGGTCATCAATTGAAGAACTTCTGCAAATATACAACCACTCTGAAAGTGTTGCACTGGCTGTGGACAATCCTGAAATGTTTAATCGGATTGCAAAACCATTTTACTTAAAGAGTTCAATCAGATTTATCATTCTTCTTTGGGGAGAAAAATCATGCCTGGTTAGTGAAGGAAACAAGGAGGTGCCAATCTTTACATTCATGGAAGTCATACATTTAGGGCGAGAATGTCGCAAGGCATTGTTTGAGTGCCATGATGCTAGACAACCCTATAAGTTTGAAGCAATAAAATCTGATGACATAGCTACTCTTGTGTACACAAGTGGAACTACTGGAAATCCAAAAGGTGTTATGCTAACCCATCACAATCTTTTGCATCAGATCAAACACTTAACGGATGTTGCACCTGCTGAAGTTGGGGATATATTTCTAAGTATGCTGCCTCCATGGCATGCATATGAAAGAGCTTGCGAGTATTTCATTTTCGCACGTGGTGTTGAACAAATATACACTACCGTGAGAAACTTGAAGGATGATTTGGGACGTTATCAGCCACAGTTGATGGTTTCTGTTCCTTTAGTTTATGAAACTTTGTACAGTGGGATCCAAAAGCAGATATCAACAAGCTCACTTATTAGAAAGTTTGTCGCACTCACATTCATACGGATCAGCTTAGGGTACATGGAGTATAAGCGAATTTATGAGGGTAAATGTTTAACATCGAATCAGAAGCCACCTTCCTTTCTCTATTCAATATTAGACTTAATATGGGCAAGACTTATAGCTGCAATACTATATCCAATTCATATGCTGGCAAATAAACTGGTCTACAGTAAAATCCGTTCAACCATTGGAATATCAAAGGTTGCAATAAGTGGTGGTGGTAGCTTACCTTCTCATGTTGATAAATTTTTTGAGGCTATTGGTTTCAATTTGCAGAATGGATATGGTTTAACAGAAACTTCACCGGTTATTGCTGCTCGGCGACCTGGTTGTGACGTTATTGGATCTGTGGGGTATCCAATCAAGCATACAGAATTCAAAGTTGTAGATTCTGAAACTGGTGAAATTCTTCCACCTGGTTCAAAGGGAATACTGAAAGTCAGGGGCCCACCATTGATGAAAGGATACTACAAGAATCCTTCAGCTACAAGTCAGGCCATAGATAGGGATGGCTGGCTGAATACTGGTGACATAGGTTGGATTGTTCCCTACCATTCAACTGGACGGAGTCGTAATTCTGGTGGTGTGATTGTTGTTGAAGGTCGTGCTAAAGACACCATTGTGCTTTCATCAGGTGAAAATGTTGAACCGGGAGAACTTGAAGAAGCTGCGTTGAGAAGTAACCTCATACAACAAATTGTTGTTATTGGCCAGGATAAGCGACGTCTGGGAGCTGTAGTTGTTCCTAATAAAGAAGGAGCTTTAAAGGTAGCGAGGGAATTGTCAATTATAGATTCCAAAAGTTCAGATATCAGTCAAGAAAAATTGACCAGTCTAATATATAATGAATTAAGGACCTGGACGTCAGAGTTTCCATTTCAAATTGGGCCAATCCTTCTCGTGAATGATCCCTTCACGATTGATAATGGGCTAATGACACCCACAATGAAAATTCGAAGGGATAGAGTTATGGCTCAATTCAAGGACCAAATAGAGAATCTATACAAGTAA 1743 0.3999 MSLACSRSSLGMMAIGAINVVRGSRSSIEELLQIYNHSESVALAVDNPEMFNRIAKPFYLKSSIRFIILLWGEKSCLVSEGNKEVPIFTFMEVIHLGRECRKALFECHDARQPYKFEAIKSDDIATLVYTSGTTGNPKGVMLTHHNLLHQIKHLTDVAPAEVGDIFLSMLPPWHAYERACEYFIFARGVEQIYTTVRNLKDDLGRYQPQLMVSVPLVYETLYSGIQKQISTSSLIRKFVALTFIRISLGYMEYKRIYEGKCLTSNQKPPSFLYSILDLIWARLIAAILYPIHMLANKLVYSKIRSTIGISKVAISGGGSLPSHVDKFFEAIGFNLQNGYGLTETSPVIAARRPGCDVIGSVGYPIKHTEFKVVDSETGEILPPGSKGILKVRGPPLMKGYYKNPSATSQAIDRDGWLNTGDIGWIVPYHSTGRSRNSGGVIVVEGRAKDTIVLSSGENVEPGELEEAALRSNLIQQIVVIGQDKRRLGAVVVPNKEGALKVARELSIIDSKSSDISQEKLTSLIYNELRTWTSEFPFQIGPILLVNDPFTIDNGLMTPTMKIRRDRVMAQFKDQIENLYK 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01976 580 SUPERFAMILY Acetyl-CoA synthetase-like 9 579 - -
Car05g01976 580 ProSitePatterns Putative AMP-binding domain signature. 127 138 IPR020845 -
Car05g01976 580 PRINTS AMP-binding signature 122 133 IPR020459 -
Car05g01976 580 PRINTS AMP-binding signature 134 142 IPR020459 -
Car05g01976 580 PANTHER LONG-CHAIN-FATTY-ACID COA LIGASE (AMP-FORMING) 10 580 - -
Car05g01976 580 Pfam AMP-binding enzyme 9 453 IPR000873 -
Car05g01976 580 Gene3D - 2 244 IPR042099 -
Car05g01976 580 PANTHER ACYL-ACTIVATING ENZYME 16, CHLOROPLASTIC-RELATED 10 580 - -
Car05g01976 580 Gene3D - 311 354 - -
Car05g01976 580 Gene3D - 449 577 IPR045851 -
Car05g01976 580 Gene3D Luciferase; Domain 3 355 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01976 Car-Chr5 65086777 65096075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01976 11 580 Acyl Lipid Metabolism Gene Families AT3G23790 68.651 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01976 K01897 - gmx:100782583 945.266