Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01973 ATGGACGAAAAACCAACTATGATAATTCGAAGTCACAATAATAATCATCAACTCTGGTTTGCAATTCTAATTTCCTTTCTCTTTTGCACTTTACTTATATGCTTTGATTATTCCAAAACATTTCATACTCCCAACAACAATCTCCTCACTTTCTCACTCAACAAACAACAAAACACAGATTCATGCACTAACCGTTATGTTTACATTCACAATCTCCCTTCTCGTTTCAACCATTTTTTGCTTCAAAATTGTCACTTTCTCACTAGAGGAACCGACAAAACCAACATGTGTCCATACATCAACAACATGGGTTTAGGTCCCGAGATTAAAAATCATAACTTTGAAGGAAAAAATGATAATGTTCTTGTCCCAAACAATACTTGGTATGCTACTAACCAGTTTTTATTGGAGGTTATTTTTCACAATAGGATGAAAAATTATGAATGTTTGACCAATGATTCATCCTTAGCTTCTGCTATTTTTGTTCCTTCTTATATTGGTCTTGATGTTAGTCGTTTCCTTTGGGTTTCTAATCTTACAGTCAGAGATTCATCTGGTTTTGAACTTGTTAAATGGCTTGTGGAAAAACCTGAATGGAAGAGAATGTTTGGTAGAGATCATTTTATTGTTTCTGGAAGAATTTCTTGGGATTTTAGAAGACAATTTGATGATTTGGCTTATTGGGGTAGCAAGTTTAGGTTTTTACCTGAATCTATGAACATGTCAATGTTAGCAGTTGAAGGTAGTTCATGGAAAAATGATTATGCAATACCTTATCCAACTTCATTTCATCCTTCAATGGATAATGATGTTTACCAATGGCAGAACAAAATCAGACATCAAAAAAGGGAATTTTTGTTTACTTTCACAGGAGCACCAAGGCCTGAACTTGAAGATTCTATGAGGGGGAAAATCATTCAACATTGTAGAGGTTCAAGTGTTTGCAAATTCATTGATTGTAGTTATGGTGTTGAGAACTGTGACAATCCCGTTAATGTTATGAAAGTGTTTGAAAATTCTGTGTTCTCTTTGCAGCCTCCTGGTGATTCATACACAAGAAGATCGATTTTTGATTCCATTTTGGCAGGTTGTATTCCTGTTTTCTTTCATCCGGGTACGGCTTATTCCCAATATCGATGGCATTTACCAAAAAACAGAACTAAGTATTCTGTTTATATACCTGTGAAGGATGTGAAAAAATGGAATGTTGATATTGAGAAAGTGTTGTTGGGAATTCCAGAGAATGAAGTGATTGCAATGAGAGAGGAGGTTATAAAGCTTGTTCCAAAAATAGTTTATGCAGATCCTAATACTAAGTTAGATAAATTTGAAGATGCATTTGATTTAGCACTAAAAGGGATACTTGAAAGGATAGAGAATGTAAGGGAAGCAATGAGGGAAGGAAGAGATCCTAGTGTTGGTTTTGCAGATGAAGATCATTATAAGTATACATTTTCTGTTCTGTTTGCGGACAAAAACGGAAGAACATAA 1491 0.3461 MDEKPTMIIRSHNNNHQLWFAILISFLFCTLLICFDYSKTFHTPNNNLLTFSLNKQQNTDSCTNRYVYIHNLPSRFNHFLLQNCHFLTRGTDKTNMCPYINNMGLGPEIKNHNFEGKNDNVLVPNNTWYATNQFLLEVIFHNRMKNYECLTNDSSLASAIFVPSYIGLDVSRFLWVSNLTVRDSSGFELVKWLVEKPEWKRMFGRDHFIVSGRISWDFRRQFDDLAYWGSKFRFLPESMNMSMLAVEGSSWKNDYAIPYPTSFHPSMDNDVYQWQNKIRHQKREFLFTFTGAPRPELEDSMRGKIIQHCRGSSVCKFIDCSYGVENCDNPVNVMKVFENSVFSLQPPGDSYTRRSIFDSILAGCIPVFFHPGTAYSQYRWHLPKNRTKYSVYIPVKDVKKWNVDIEKVLLGIPENEVIAMREEVIKLVPKIVYADPNTKLDKFEDAFDLALKGILERIENVREAMREGRDPSVGFADEDHYKYTFSVLFADKNGRT 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01973 496 PANTHER XYLOGLUCAN GALACTOSYLTRANSFERASE GT14-RELATED 12 474 - -
Car05g01973 496 Pfam Exostosin family 62 408 IPR040911 -
Car05g01973 496 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 12 474 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01973 Car-Chr5 65066453 65068387 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01973 - - gmx:100780962 753.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01973 05 65066453 65068387 Car05g01973 05 65066453 65068387 ECH